CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf527
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-5722518
T145446_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI68540
C2H2 ZF
66
88
FTCTQCGKSFGGNGNPKIHMIIH
AAI68540
C2H2 ZF
94
116
FTCTQCGKTFSQSSHLNDHMMIH
AAI68540
C2H2 ZF
122
144
FTCTQCGKSFIRLSLLNQHMMIH
AAI68540
C2H2 ZF
150
172
FTCTQCGKSFRQSSYLNEHMMIH
AAI68540
C2H2 ZF
178
200
FTCTQCWKSFSRSSDFNRHMRIH
AAI68540
C2H2 ZF
206
228
FTCTQCGKSFSCSSSLNKHMRIH
AAI68540
C2H2 ZF
234
256
FTCTQCGKSFSQSSDLNKHMMIH
AAI68540
C2H2 ZF
262
284
FTCTQCGKSFGRSSNLNRHMRNH
AAI68540
C2H2 ZF
290
312
FACTKCGKSFNCSSHLNRHMRNH
AAI68540
C2H2 ZF
318
340
FTCTQCGKSFRQPSLLYLHMISH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CABZ01002188.1
Danio rerio
ENSDARG00000100415
N
0.785
si:dkeyp-85d8.5
Danio rerio
ENSDARG00000102999
N
0.784
si:dkey-246j6.1
Danio rerio
ENSDARG00000101594
N
0.780
ENSDARG00000101539
Danio rerio
ENSDARG00000101539
N
0.775