CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prdm9
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-5904900
T145486_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI57515
C2H2 ZF
140
162
FICPKCERRFCDIRNLLTHQRIH
AAI57515
C2H2 ZF
167
189
FVCSKCGKCFSHRKILIAHKWVH
AAI57515
C2H2 ZF
195
217
FTCTECDKGFLWNRDLQEHKKSH
AAI57515
C2H2 ZF
248
270
FYCRECGKSFRQKSRLEIHIQCH
AAI57515
C2H2 ZF
276
298
FVCVHCGKGFRDKYKLSLHLRIH
AAI57515
C2H2 ZF
304
326
FVCTECGKGFRDSSSLKSHLQIH
AAI57515
C2H2 ZF
332
354
FVCTECGKCFRDKSELNIHINVH
AAI57515
C2H2 ZF
359
381
FPCTECGKSFAAKNNLKRHQMVH
AAI57515
C2H2 ZF
387
409
HECTECGKRFMEKSKLERHYLNH
AAI57515
C2H2 ZF
415
437
FSCCECGEQFKWKHQLQYHQLSH
AAI57515
C2H2 ZF
443
465
FVCTECGKSYKSKDTLTAHCLIH
AAI57515
C2H2 ZF
471
493
FVCPECGKPYKSYSALRYHLQTH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found