CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf628
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-5996090
T145505_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002941933
C2H2 ZF
32
54
YECHECGKVFKWSSRLIHHQRTH
XP_002941933
C2H2 ZF
60
82
YKCTECPKAFKGSSALLYHQRSH
XP_002941933
C2H2 ZF
88
110
YKCESCGKAFKRSSLLQIHQSVH
XP_002941933
C2H2 ZF
116
138
FKCNICGMAFKWSSHYQYHVRQH
XP_002941933
C2H2 ZF
144
166
YQCNVCEKAFKNSSSLRRHRNIH
XP_002941933
C2H2 ZF
172
194
YECAICGKAFTQSTNLRQHQRIH
XP_002941933
C2H2 ZF
200
222
YKCEDCGKSFTHSSNLLLHQRTH
XP_002941933
C2H2 ZF
228
250
HKCEICGKVFISDSFLQKHLQSH
XP_002941933
C2H2 ZF
278
300
FKCGDCEMTFKNEDLLLGHQQTH
XP_002941933
C2H2 ZF
305
328
YPCTNCDKTFKNPSGLSRHNQHCH
XP_002941933
C2H2 ZF
334
356
FKCSICEKTFVQLSNLLVHQRTH
XP_002941933
C2H2 ZF
394
416
YKCTECGKAFKGTSGLRYHMRDH
XP_002941933
C2H2 ZF
422
444
YKCSECGKAFKRSSLLSIHQRVH
XP_002941933
C2H2 ZF
450
472
FKCAECGLTFKWSSHYQYHLRQH
XP_002941933
C2H2 ZF
478
500
YTCTDCGKSFKNTSCLRRHRQLH
XP_002941933
C2H2 ZF
506
528
FTCLMCGKTFTQTSNLRQHERTH
XP_002941933
C2H2 ZF
534
556
YKCDKCDKSFTHSSNLQLHQRTH
XP_002941933
C2H2 ZF
562
584
FKCTVCGKSFVMSSYLQRHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found