gli2.S (Xenopus laevis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-6251939 T145535_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli3
M01022_2.00 		Mus musculus
NGACCACCCNN
NNGGGTGGTCN		 PBM
Peterson et al.(2012)
Gli3 		0.815 0.957
Gli3
M08023_2.00 		Mus musculus
RGVCCACCCAS
STGGGTGGBCY		 ChIP-seq
Chen et al.(2011)
GSE11062_Gli3 		0.815 0.957
Gli3
M09512_2.00 		Mus musculus
RGACCACCCASR
YSTGGGTGGTCY		 Misc
Heinz et al.(2010)
Limb-GLI3_GSE11077 		0.815 0.957
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.771 0.939
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.771 0.939
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.771 0.939
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.771 0.939
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.771 0.939
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.771 0.939
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.771 0.939
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.771 0.939
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.771 0.939
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.769 0.948
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.769 0.948
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.769 0.948
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.769 0.948
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.769 0.948
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.769 0.948
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAD28180 C2H2 ZF 287 312
AAD28180 C2H2 ZF 320 347
AAD28180 C2H2 ZF 353 377
AAD28180 C2H2 ZF 383 408
AAD28180 C2H2 ZF 414 439

Links

Other C2H2 ZF family TFs
Other Xenopus laevis TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gli2.L Xenopus laevis XB-GENE-17342592 I 0.823
Gli3 Mus musculus ENSMUSG00000021318 D 0.815
GLI3 Cavia porcellus ENSCPOG00000013233 I 0.815
Gli3 Rattus norvegicus ENSRNOG00000014395 I 0.815
ENSSTOG00000020844 Ictidomys tridecemlineatus ENSSTOG00000020844 I 0.815
ENSGMOG00000007975 Gadus morhua ENSGMOG00000007975 I 0.813
gli1 Gasterosteus aculeatus ENSGACG00000006458 I 0.813
gli1 Takifugu rubripes ENSTRUG00000014998 I 0.813
ENSONIG00000004472 Oreochromis niloticus ENSONIG00000004472 I 0.812
ENSLOCG00000002028 Lepisosteus oculatus ENSLOCG00000002028 I 0.812
ENSONIG00000005084 Oreochromis niloticus ENSONIG00000005084 I 0.811
gli1 Oryzias latipes ENSORLG00000005455 I 0.811
ENSPFOG00000006269 Poecilia formosa ENSPFOG00000006269 I 0.811
ENSXMAG00000017965 Xiphophorus maculatus ENSXMAG00000017965 I 0.811
ENSONIG00000003608 Oreochromis niloticus ENSONIG00000003608 I 0.810
gli1 Tetraodon nigroviridis ENSTNIG00000007058 I 0.810
ENSPFOG00000014778 Poecilia formosa ENSPFOG00000014778 I 0.809
ENSGMOG00000010335 Gadus morhua ENSGMOG00000010335 I 0.809
gli2a Danio rerio ENSDARG00000025641 I 0.808
fgenesh2_pg.scaffold_169000072 Branchiostoma floridae fgenesh2_pg.scaffold_169000072 I 0.804
fgenesh2_pg.scaffold_137000068 Branchiostoma floridae fgenesh2_pg.scaffold_137000068 I 0.804
gli2b Takifugu rubripes ENSTRUG00000001954 I 0.803
gli2b Gasterosteus aculeatus ENSGACG00000001547 I 0.803
ENSLOCG00000011983 Lepisosteus oculatus ENSLOCG00000011983 I 0.778
GLI2 Otolemur garnettii ENSOGAG00000032438 I 0.776
ENSMGAG00000003540 Meleagris gallopavo ENSMGAG00000003540 I 0.774
ENSGALG00000014639 Gallus gallus ENSGALG00000014639 I 0.774
gli1 Danio rerio ENSDARG00000101244 I 0.774
GLI2 Monodelphis domestica ENSMODG00000000245 I 0.773
ENSSHAG00000004233 Sarcophilus harrisii ENSSHAG00000004233 I 0.773
GLI2 Macaca mulatta ENSMMUG00000001868 I 0.771
GLI2 Pan troglodytes ENSPTRG00000012413 I 0.771
GLI2 Bos taurus ENSBTAG00000011682 I 0.771
ENSP00000390436-D1 Bos grunniens ENSP00000390436-D1 I 0.771
ENSMPUG00000000986 Mustela putorius furo ENSMPUG00000000986 I 0.771
ENSPANG00000024168 Papio anubis ENSPANG00000024168 I 0.771
GLI2 Oryctolagus cuniculus ENSOCUG00000000638 I 0.771
ENSAMEG00000008708 Ailuropoda melanoleuca ENSAMEG00000008708 I 0.771
ENSOARG00000013052 Ovis aries ENSOARG00000013052 I 0.771
ENSNLEG00000000944 Nomascus leucogenys ENSNLEG00000000944 I 0.771
ENSMMUP00000002494 Macaca fascicularis ENSMMUP00000002494 I 0.771
Myotis_brandtii_Gli2_10019076 Myotis brandtii Myotis_brandtii_Gli2_10019076 I 0.771
Gli2 Mus musculus ENSMUSG00000048402 D 0.771
ENSPPYG00000012778 Pongo abelii ENSPPYG00000012778 I 0.771
Gli2 Rattus norvegicus ENSRNOG00000007261 I 0.771
ENSCSAG00000016668 Chlorocebus sabaeus ENSCSAG00000016668 I 0.771
gli3 Danio rerio ENSDARG00000052131 I 0.771
GLI2 Dasypus novemcinctus ENSDNOG00000008730 I 0.771
GLI2 Felis catus ENSFCAG00000014531 I 0.771
GLI2 Homo sapiens ENSG00000074047 D 0.771
GLI2 Canis familiaris ENSCAFG00000004821 I 0.771
GLI2 Sus scrofa ENSSSCG00000015733 I 0.771
GLI2 Cavia porcellus ENSCPOG00000015189 I 0.771
ENSSTOG00000004582 Ictidomys tridecemlineatus ENSSTOG00000004582 I 0.771
ENSCJAG00000013342 Callithrix jacchus ENSCJAG00000013342 I 0.771
Pvit_19093 Pogona vitticeps Pvit_19093 I 0.769
GLI3 Procavia capensis ENSPCAG00000015092 I 0.769
ENSPANG00000014545 Papio anubis ENSPANG00000014545 I 0.769
XP_002933449 Xenopus tropicalis XP_002933449 I 0.769
XP_002933450 Xenopus tropicalis XP_002933450 I 0.769
gli3.L Xenopus laevis XB-GENE-865509 I 0.769
ENSTSYG00000009406 Tarsius syrichta ENSTSYG00000009406 I 0.769
Afo_R007816 Aptenodytes forsteri Afo_R007816 I 0.769
GLI3 Tursiops truncatus ENSTTRG00000003628 I 0.769
Brh_R008256 Buceros rhinoceros Brh_R008256 I 0.769
Cmyd_10007839 Chelonia mydas Cmyd_10007839 I 0.769
GLI3 Pteropus vampyrus ENSPVAG00000015920 I 0.769
Aan_R014715 Calypte anna Aan_R014715 I 0.769
ENSP00000379258 Macaca fascicularis ENSP00000379258 I 0.769
GLI3 Pan troglodytes ENSPTRG00000019117 I 0.769
GLI3 Ochotona princeps ENSOPRG00000011225 I 0.769
ENSSHAG00000009727 Sarcophilus harrisii ENSSHAG00000009727 I 0.769
ENSPPYG00000017613 Pongo abelii ENSPPYG00000017613 I 0.769
GLI3 Tupaia belangeri ENSTBEG00000006673 I 0.769
ENSPSIG00000017804 Pelodiscus sinensis ENSPSIG00000017804 I 0.769
Gfo_R007869 Geospiza fortis Gfo_R007869 I 0.769
ENSOARG00000017420 Ovis aries ENSOARG00000017420 I 0.769
ENSAMEG00000008405 Ailuropoda melanoleuca ENSAMEG00000008405 I 0.769
GLI3 Equus caballus ENSECAG00000009281 I 0.769
GLI3 Otolemur garnettii ENSOGAG00000012651 I 0.769
GLI3 Felis catus ENSFCAG00000011989 I 0.769
GLI3 Homo sapiens ENSG00000106571 D 0.769
GLI3 Gorilla gorilla ENSGGOG00000002026 I 0.769
ENSGALG00000012329 Gallus gallus ENSGALG00000012329 I 0.769
GLI3 Anolis carolinensis ENSACAG00000017547 I 0.769
GLI3 Dasypus novemcinctus ENSDNOG00000049286 I 0.769
GLI3 Bos taurus ENSBTAG00000010671 I 0.769
ENSAPLG00000004361 Anas platyrhynchos ENSAPLG00000004361 I 0.769
ENSAMXG00000002477 Astyanax mexicanus ENSAMXG00000002477 I 0.769
GLI3 Canis familiaris ENSCAFG00000003535 I 0.769
GLI3 Choloepus hoffmanni ENSCHOG00000003774 I 0.769
ENSCSAG00000015361 Chlorocebus sabaeus ENSCSAG00000015361 I 0.769
GLI3 Callithrix jacchus ENSCJAG00000007690 I 0.769
ENSLACG00000017364 Latimeria chalumnae ENSLACG00000017364 I 0.769
ENSFALG00000005113 Ficedula albicollis ENSFALG00000005113 I 0.769
GLI3 Macaca mulatta ENSMMUG00000013614 I 0.769
GLI3 Myotis lucifugus ENSMLUG00000015711 I 0.769
GLI3 Monodelphis domestica ENSMODG00000002714 I 0.769
ENSNLEG00000003160 Nomascus leucogenys ENSNLEG00000003160 I 0.769
GLI3 Oryctolagus cuniculus ENSOCUG00000006563 I 0.769
GLI3 Ornithorhynchus anatinus ENSOANG00000010699 I 0.769
GLI3 Meleagris gallopavo ENSMGAG00000012277 I 0.769
ENSMPUG00000018143 Mustela putorius furo ENSMPUG00000018143 I 0.769
ENSMEUG00000013134 Macropus eugenii ENSMEUG00000013134 I 0.769
GLI3 Loxodonta africana ENSLAFG00000008944 I 0.769
GLI2 Procavia capensis ENSPCAG00000001704 I 0.768
Pvit_05813 Pogona vitticeps Pvit_05813 I 0.767
GLI2 Gorilla gorilla ENSGGOG00000009653 I 0.767
GLI1 Anolis carolinensis ENSACAG00000006541 I 0.767
Pvit_06470 Pogona vitticeps Pvit_06470 I 0.766
GLI2 Anolis carolinensis ENSACAG00000004133 I 0.766
Ogr02489 Ophisaurus gracilis Ogr02489 I 0.766
gli2b Danio rerio ENSDARG00000020884 I 0.766
gli2b Takifugu rubripes ENSTRUG00000010444 I 0.766
ENSAMXG00000003125 Astyanax mexicanus ENSAMXG00000003125 I 0.766
ENSAMXG00000006646 Astyanax mexicanus ENSAMXG00000006646 I 0.766
Gfo_R013682 Geospiza fortis Gfo_R013682 I 0.765
Tal_R009020 Tyto alba Tal_R009020 I 0.765
ENSAPLG00000005128 Anas platyrhynchos ENSAPLG00000005128 I 0.765
Gfo_R001212 Geospiza fortis Gfo_R001212 I 0.764
Tal_R006208 Tyto alba Tal_R006208 I 0.764
ENSAMXG00000017236 Astyanax mexicanus ENSAMXG00000017236 I 0.764
Cmyd_10009086 Chelonia mydas Cmyd_10009086 I 0.764
Aan_R003640 Calypte anna Aan_R003640 I 0.764
GLI2 Taeniopygia guttata ENSTGUG00000004599 I 0.764
ENSPSIG00000008752 Pelodiscus sinensis ENSPSIG00000008752 I 0.764
GLI2 Meleagris gallopavo ENSMGAG00000011872 I 0.764
Afo_R006826 Aptenodytes forsteri Afo_R006826 I 0.764
GLI2 Gallus gallus ENSGALG00000011630 I 0.764
ENSLOCG00000005938 Lepisosteus oculatus ENSLOCG00000005938 I 0.764
ENSAPLG00000015141 Anas platyrhynchos ENSAPLG00000015141 I 0.764
Brh_R010932 Buceros rhinoceros Brh_R010932 I 0.764
ENSFALG00000013217 Ficedula albicollis ENSFALG00000013217 I 0.764
ENSXMAG00000006443 Xiphophorus maculatus ENSXMAG00000006443 I 0.763
ENSPFOG00000005116 Poecilia formosa ENSPFOG00000005116 I 0.763
GLI2 Tursiops truncatus ENSTTRG00000002058 I 0.762
ENSECAG00000008016 Equus caballus ENSECAG00000008016 I 0.761
gli2b Tetraodon nigroviridis ENSTNIG00000017828 I 0.757