CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prdm1.S
(
Xenopus laevis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-853257
T145589_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAF08791
C2H2 ZF
531
553
YECNICSKTFGQLSNLKVHLRVH
AAF08791
C2H2 ZF
559
581
FKCQTCNKGFTQLAHLQKHFLVH
AAF08791
C2H2 ZF
587
609
HECQVCHKRFSSTSNLKTHLRLH
AAF08791
C2H2 ZF
615
637
YQCKLCPAKFTQFVHLKLHKRLH
AAH44261
C2H2 ZF
531
553
YECNICSKTFGQLSNLKVHLRVH
AAH44261
C2H2 ZF
559
581
FKCQTCNKGFTQLAHLQKHFLVH
AAH44261
C2H2 ZF
587
609
HECQVCHKRFSSTSNLKTHLRLH
AAH44261
C2H2 ZF
615
637
YQCKLCPAKFTQFVHLKLHKRLH
AAH60348
C2H2 ZF
531
553
YECNICSKTFGQLSNLKVHLRVH
AAH60348
C2H2 ZF
559
581
FKCQTCNKGFTQLAHLQKHFLVH
AAH60348
C2H2 ZF
587
609
HECQVCHKRFSSTSNLKTHLRLH
AAH60348
C2H2 ZF
615
637
YQCKLCPAKFTQFVHLKLHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus laevis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy