ovol2 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-854193 T145595_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN

NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.805 0.891
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN

NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.805 0.891
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.805 0.891
OVOL2
M10207_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.805 0.891
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN

NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.805 0.891
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.805 0.891
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN

NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.796 0.880
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH75593 C2H2 ZF 131 153
AAH75593 C2H2 ZF 159 181
AAH75593 C2H2 ZF 187 210
AAH75593 C2H2 ZF 226 249
CAJ83285 C2H2 ZF 131 153
CAJ83285 C2H2 ZF 159 181
CAJ83285 C2H2 ZF 187 210
CAJ83285 C2H2 ZF 226 249

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSSHAG00000018466 Sarcophilus harrisii ENSSHAG00000018466 I 0.814
OVOL2 Monodelphis domestica ENSMODG00000005504 I 0.814
Brh_R002739 Buceros rhinoceros Brh_R002739 I 0.811
OVOL2 Gallus gallus ENSGALG00000008702 I 0.811
ENSMPUG00000001295 Mustela putorius furo ENSMPUG00000001295 I 0.811
Aan_R006310 Calypte anna Aan_R006310 I 0.811
OVOL2 Taeniopygia guttata ENSTGUG00000005909 I 0.811
OVOL2 Felis catus ENSFCAG00000027530 I 0.811
Afo_R007843 Aptenodytes forsteri Afo_R007843 I 0.811
ENSMGAG00000006770 Meleagris gallopavo ENSMGAG00000006770 I 0.811
ENSAMEG00000005266 Ailuropoda melanoleuca ENSAMEG00000005266 I 0.811
Tal_R010801 Tyto alba Tal_R010801 I 0.811
ENSFALG00000007594 Ficedula albicollis ENSFALG00000007594 I 0.811
Ovol2 Dipodomys ordii ENSDORG00000016697 I 0.808
ENSCPOG00000007912 Cavia porcellus ENSCPOG00000007912 I 0.808
ENSSTOG00000024979 Ictidomys tridecemlineatus ENSSTOG00000024979 I 0.808
ENSSARG00000006563 Sorex araneus ENSSARG00000006563 I 0.808
OVOL2 Pteropus vampyrus ENSPVAG00000001140 I 0.808
OVOL2 Pan troglodytes ENSPTRG00000013280 I 0.805
ENSPPYG00000010732 Pongo abelii ENSPPYG00000010732 I 0.805
ENSPANG00000025538 Papio anubis ENSPANG00000025538 I 0.805
OVOL2 Otolemur garnettii ENSOGAG00000030325 I 0.805
OVOL2 Oryctolagus cuniculus ENSOCUG00000012116 I 0.805
Myotis_brandtii_Ovol2_10029083 Myotis brandtii Myotis_brandtii_Ovol2_10029083 I 0.805
ENSCSAG00000011547 Chlorocebus sabaeus ENSCSAG00000011547 I 0.805
OVOL2 Gorilla gorilla ENSGGOG00000024444 I 0.805
ENSP00000278780 Macaca fascicularis ENSP00000278780 I 0.805
OVOL2 Homo sapiens ENSG00000125850 D 0.805
OVOL2 Loxodonta africana ENSLAFG00000010597 I 0.805
OVOL2 Equus caballus ENSECAG00000007899 I 0.805
ENSMMUG00000021621 Macaca mulatta ENSMMUG00000021621 I 0.805
ENSMLUG00000026760 Myotis lucifugus ENSMLUG00000026760 I 0.805
ENSMICG00000017455 Microcebus murinus ENSMICG00000017455 I 0.805
ENSNLEG00000009741 Nomascus leucogenys ENSNLEG00000009741 I 0.805
ENSOARG00000018244 Ovis aries ENSOARG00000018244 I 0.803
OVOL2 Echinops telfairi ENSETEG00000006907 I 0.802
Cmyd_10010114 Chelonia mydas Cmyd_10010114 I 0.802
Alligator_sinensis_CCG008208.1 Alligator sinensis Alligator_sinensis_CCG008208.1 I 0.802
ENSPSIG00000006768 Pelodiscus sinensis ENSPSIG00000006768 I 0.802
ENSOANG00000001250 Ornithorhynchus anatinus ENSOANG00000001250 I 0.802
ENSAPLG00000016199 Anas platyrhynchos ENSAPLG00000016199 I 0.801
OVOL2 Canis familiaris ENSCAFG00000005453 I 0.799
OVOL2 Ochotona princeps ENSOPRG00000015054 I 0.798
Ovol2 Mus musculus ENSMUSG00000037279 D 0.796
Ovol2 Rattus norvegicus ENSRNOG00000006850 I 0.796
OVOL2 Tursiops truncatus ENSTTRG00000016430 I 0.791
ENSBTAP00000011067-D1 Bos grunniens ENSBTAP00000011067-D1 I 0.791
OVOL2 Bos taurus ENSBTAG00000008410 I 0.791
ENSMEUG00000011922 Macropus eugenii ENSMEUG00000011922 I 0.779
Pvit_03654 Pogona vitticeps Pvit_03654 I 0.778
OVOL2 Anolis carolinensis ENSACAG00000014216 I 0.764
Ogr08372 Ophisaurus gracilis Ogr08372 I 0.764