CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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plag1
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-868443
T145625_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PLAG1
M06465_2.00
Homo sapiens
CCCCCKWDGGCCCC
GGGGCCHWMGGGGG
B1H
Mathelier et al.(2014)
MA0163.1
0.782
0.963
PLAG1
M10286_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_01
0.782
0.963
PLAG1
M10287_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_02
0.782
0.963
PLAG1
M10288_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_08
0.782
0.963
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002934153
C2H2 ZF
34
56
FPCQLCEKAFNSVEKLKVHSYTH
XP_002934153
C2H2 ZF
62
86
YKCTQQDCTKAFVSKYKLLRHMATH
XP_002934153
C2H2 ZF
92
114
HKCNYCEKMFHRKDHLKNHLHTH
XP_002934153
C2H2 ZF
121
143
FKCEECGKNYNTKLGFKRHLALH
XP_002934153
C2H2 ZF
150
172
LTCKVCLQTFESTVVLLEHLKTH
XP_002934153
C2H2 ZF
185
207
HQCEHCDRRFYTRKDVRRHMVVH
XP_002934153
C2H2 ZF
213
236
FLCQYCAQRFGRKDHLTRHMKKSH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy