trerf1 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-940630 T145633_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002934726 C2H2 ZF 482 504
XP_002934726 C2H2 ZF 959 983
XP_002934726 C2H2 ZF 1031 1053

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSSHAG00000004599 Sarcophilus harrisii ENSSHAG00000004599 N 0.852
TRERF1 Monodelphis domestica ENSMODG00000019042 N 0.852
TRERF1 Myotis lucifugus ENSMLUG00000016748 N 0.843
TRERF1 Cavia porcellus ENSCPOG00000015717 N 0.843
TRERF1 Tursiops truncatus ENSTTRG00000014065 N 0.843
Myotis_brandtii_Trerf1_10015386 Myotis brandtii Myotis_brandtii_Trerf1_10015386 N 0.843
ENSOARG00000003358 Ovis aries ENSOARG00000003358 N 0.835
ENSBTAP00000020376-D1 Bos grunniens ENSBTAP00000020376-D1 N 0.835
TRERF1 Pteropus vampyrus ENSPVAG00000007626 N 0.835
Trerf1 Rattus norvegicus ENSRNOG00000022598 N 0.835
TRERF1 Sus scrofa ENSSSCG00000001639 N 0.835
TRERF1 Loxodonta africana ENSLAFG00000007825 N 0.835
ENSTBEG00000012133 Tupaia belangeri ENSTBEG00000012133 N 0.835
ENSMPUG00000013360 Mustela putorius furo ENSMPUG00000013360 N 0.835
TRERF1 Felis catus ENSFCAG00000011210 N 0.835
TRERF1 Choloepus hoffmanni ENSCHOG00000006120 N 0.835
TRERF1 Equus caballus ENSECAG00000016971 N 0.835
TRERF1 Canis familiaris ENSCAFG00000001642 N 0.835
TRERF1 Bos taurus ENSBTAG00000015321 N 0.835
ENSLOCG00000017240 Lepisosteus oculatus ENSLOCG00000017240 N 0.833
ENSLACG00000008926 Latimeria chalumnae ENSLACG00000008926 N 0.826
ENSPANG00000009451 Papio anubis ENSPANG00000009451 N 0.826
ENSSTOG00000022996 Ictidomys tridecemlineatus ENSSTOG00000022996 N 0.826
TRERF1 Ornithorhynchus anatinus ENSOANG00000008467 N 0.826
TRERF1 Gorilla gorilla ENSGGOG00000012813 N 0.826
ENSNLEG00000004772 Nomascus leucogenys ENSNLEG00000004772 N 0.826
TRERF1 Callithrix jacchus ENSCJAG00000004347 N 0.826
TRERF1 Otolemur garnettii ENSOGAG00000025610 N 0.826
TRERF1 Homo sapiens ENSG00000124496 N 0.826
ENSTSYG00000003874 Tarsius syrichta ENSTSYG00000003874 N 0.817
ENSPSIG00000009755 Pelodiscus sinensis ENSPSIG00000009755 N 0.817
ENSPPYG00000016614 Pongo abelii ENSPPYG00000016614 N 0.816
ENSAPLG00000014876 Anas platyrhynchos ENSAPLG00000014876 N 0.809
Pvit_13408 Pogona vitticeps Pvit_13408 N 0.809
TRERF1 Taeniopygia guttata ENSTGUG00000003250 N 0.800
TRERF1 Meleagris gallopavo ENSMGAG00000013894 N 0.800
ENSFALG00000012590 Ficedula albicollis ENSFALG00000012590 N 0.798
TRERF1 Gallus gallus ENSGALG00000009896 N 0.791
TRERF1 Anolis carolinensis ENSACAG00000001080 N 0.791
Aan_R011464 Calypte anna Aan_R011464 N 0.791