trerf1 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-940630 T145633_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002934726 C2H2 ZF 482 504
XP_002934726 C2H2 ZF 959 983
XP_002934726 C2H2 ZF 1031 1053

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R011464 Calypte anna Aan_R011464 N 0.791
ENSAPLG00000014876 Anas platyrhynchos ENSAPLG00000014876 N 0.809
ENSBTAP00000020376-D1 Bos grunniens ENSBTAP00000020376-D1 N 0.835
ENSFALG00000012590 Ficedula albicollis ENSFALG00000012590 N 0.798
ENSLACG00000008926 Latimeria chalumnae ENSLACG00000008926 N 0.826
ENSLOCG00000017240 Lepisosteus oculatus ENSLOCG00000017240 N 0.833
ENSMPUG00000013360 Mustela putorius furo ENSMPUG00000013360 N 0.835
ENSNLEG00000004772 Nomascus leucogenys ENSNLEG00000004772 N 0.826
ENSOARG00000003358 Ovis aries ENSOARG00000003358 N 0.835
ENSPANG00000009451 Papio anubis ENSPANG00000009451 N 0.826
ENSPPYG00000016614 Pongo abelii ENSPPYG00000016614 N 0.816
ENSPSIG00000009755 Pelodiscus sinensis ENSPSIG00000009755 N 0.817
ENSSHAG00000004599 Sarcophilus harrisii ENSSHAG00000004599 N 0.852
ENSSTOG00000022996 Ictidomys tridecemlineatus ENSSTOG00000022996 N 0.826
ENSTBEG00000012133 Tupaia belangeri ENSTBEG00000012133 N 0.835
ENSTSYG00000003874 Tarsius syrichta ENSTSYG00000003874 N 0.817
Myotis_brandtii_Trerf1_10015386 Myotis brandtii Myotis_brandtii_Trerf1_10015386 N 0.843
Pvit_13408 Pogona vitticeps Pvit_13408 N 0.809
TRERF1 Monodelphis domestica ENSMODG00000019042 N 0.852
TRERF1 Sus scrofa ENSSSCG00000001639 N 0.835
TRERF1 Equus caballus ENSECAG00000016971 N 0.835
TRERF1 Cavia porcellus ENSCPOG00000015717 N 0.843
TRERF1 Taeniopygia guttata ENSTGUG00000003250 N 0.800
TRERF1 Callithrix jacchus ENSCJAG00000004347 N 0.826
TRERF1 Tursiops truncatus ENSTTRG00000014065 N 0.843
TRERF1 Choloepus hoffmanni ENSCHOG00000006120 N 0.835
TRERF1 Canis familiaris ENSCAFG00000001642 N 0.835
TRERF1 Bos taurus ENSBTAG00000015321 N 0.835
TRERF1 Felis catus ENSFCAG00000011210 N 0.835
Trerf1 Rattus norvegicus ENSRNOG00000022598 N 0.835
TRERF1 Myotis lucifugus ENSMLUG00000016748 N 0.843
TRERF1 Meleagris gallopavo ENSMGAG00000013894 N 0.800
TRERF1 Ornithorhynchus anatinus ENSOANG00000008467 N 0.826
TRERF1 Loxodonta africana ENSLAFG00000007825 N 0.835
TRERF1 Otolemur garnettii ENSOGAG00000025610 N 0.826
TRERF1 Gorilla gorilla ENSGGOG00000012813 N 0.826
TRERF1 Gallus gallus ENSGALG00000009896 N 0.791
TRERF1 Homo sapiens ENSG00000124496 N 0.826
TRERF1 Pteropus vampyrus ENSPVAG00000007626 N 0.835
TRERF1 Anolis carolinensis ENSACAG00000001080 N 0.791