CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zbtb17
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-940673
T145634_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb17
M08967_2.00
Mus musculus
SBKCCCCKCCCCCNCBBBS
SVVVGNGGGGGMGGGGMVS
Misc
Kulakovskiy et al.(2013)
ZBT17_MOUSE.H11MO.0.A
0.790
0.902
ZBTB17
M08878_2.00
Homo sapiens
YHKYYCHKCCYYCWBYYNN
NNRRVWGRRGGMDGRRMDR
Misc
Kulakovskiy et al.(2013)
ZBT17_HUMAN.H11MO.0.A
0.789
0.899
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH84492
C2H2 ZF
303
325
HKCKYCGKEFTHTGNYTRHIRTH
AAH84492
C2H2 ZF
331
353
FSCRECNKAFSDPAACRAHEKTH
AAH84492
C2H2 ZF
359
381
YGCEDCGKSYRLVSLLNLHKKRH
AAH84492
C2H2 ZF
387
409
YRCTDCNKHFTTSGNLKRHQLVH
AAH84492
C2H2 ZF
415
437
YHCEYCNRPFSDPTSKMRHLETH
AAH84492
C2H2 ZF
443
465
HKCPHCDKKFNQLGNLKAHLKIH
AAH84492
C2H2 ZF
471
493
LKCRECGKQFTTSGNLKRHLRIH
AAH84492
C2H2 ZF
499
521
YVCVHCKRKFADPGALQRHVRTH
AAH84492
C2H2 ZF
527
549
CLCMICGKAFTQASSLIAHVRQH
AAH84492
C2H2 ZF
555
577
YVCERCGKRFVQSSQLANHIRHH
AAH84492
C2H2 ZF
583
605
HKCSVCNKAFVNVGDLTKHVIIH
AAH84492
C2H2 ZF
611
634
FLCDKCGRGFNRVDNLRSHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy