CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zbtb40
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-967576
T145669_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI67692
C2H2 ZF
216
239
VTCDICGKEFAHPSGLQYHKRTEH
AAI67692
C2H2 ZF
245
267
FSCDECGAKFAANSTLKNHQRLH
AAI67692
C2H2 ZF
273
296
FVCKHCHMTFTQAAALSYHTKKKH
AAI67692
C2H2 ZF
302
324
YACQYCDAVFAQSIELTRHVRTH
AAI67692
C2H2 ZF
330
353
YVCRECGKGFSQANGLSIHLRTFH
AAI67692
C2H2 ZF
359
382
YDCQKCRMSFPTLEENRQHIQVVH
AAI67692
C2H2 ZF
387
409
HPCPTCDKIFSAPSLLERHVVTH
AAI67692
C2H2 ZF
415
438
YNCEICDKAYQQLSGLWYHNRTHH
AAI67692
C2H2 ZF
454
477
TQCSSCDQTFPNAALLQKHTKAEH
AAI67692
C2H2 ZF
483
506
YECDKCKQTYPTSAALQVHIKCKH
AAI67692
C2H2 ZF
512
535
FQCLYCTDSFQFPGALQHHVATEH
AAI67692
C2H2 ZF
543
566
FGCEICGELFTVHSQLERHYETDH
XP_002937082
C2H2 ZF
910
933
VTCDICGKEFAHPSGLQYHKRTEH
XP_002937082
C2H2 ZF
939
961
FSCDECGAKFAANSTLKNHQRLH
XP_002937082
C2H2 ZF
967
990
FVCKHCHMTFTQAAALSYHTKKKH
XP_002937082
C2H2 ZF
996
1018
YACQYCDAVFAQSIELTRHVRTH
XP_002937082
C2H2 ZF
1024
1047
YVCRECGKGFSQANGLSIHLRTFH
XP_002937082
C2H2 ZF
1053
1076
YDCQKCRMSFPTLEENRQHIQVVH
XP_002937082
C2H2 ZF
1081
1103
HPCPTCDKIFSAPSLLERHVVTH
XP_002937082
C2H2 ZF
1109
1132
YNCEICDKAYQQLSGLWYHNRTHH
XP_002937082
C2H2 ZF
1148
1171
TQCSSCDQTFPNAALLQKHTKAEH
XP_002937082
C2H2 ZF
1177
1200
YECDKCKQTYPTSAALQVHIKCKH
XP_002937082
C2H2 ZF
1206
1229
FQCLYCTDSFQFPGALQHHVATEH
XP_002937082
C2H2 ZF
1237
1260
FGCEICGELFTVHSQLERHYETDH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action