sp2 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-968274 T145670_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SP2
M04525_2.00
Homo sapiens
NYWAGYCCCGCCCMCYH

DRGKGGGCGGGRCTWRN
SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX
0.806 0.884
SP2
M08326_2.00
Homo sapiens
YCCCGCCCM

KGGGCGGGR
ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE
0.806 0.884
SP2
M08092_2.00
Homo sapiens
BYCCCGCCYCYBNNB

VNNVRGRGGCGGGRV
ChIP-seq
Mathelier et al.(2014)
MA0516.1
0.806 0.884
SP2
M07932_2.00
Homo sapiens
KSCTAGAGMGGCBVB

VBVGCCKCTCTAGSM
ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha
0.806 0.884
SP2
M08911_2.00
Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS

SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A
0.806 0.884
Sp2
M08970_2.00
Mus musculus
SBBSNVSBCCCGCCYCYBBBBS

SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B
0.806 0.884
SP2
M10250_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_01
0.806 0.884
SP2
M10251_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_04
0.806 0.884
SP2
M10252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_06
0.806 0.884
SP2
M10253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3_01
0.806 0.884
SP2
M10254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3
0.806 0.884
SP2
M04526_2.00
Homo sapiens
NTWAGYCCCGCCCMCTT

AAGKGGGCGGGRCTWAN
SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX
0.806 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI54679 C2H2 ZF 471 495
AAI54679 C2H2 ZF 501 525
AAI54679 C2H2 ZF 534 556
CAJ82297 C2H2 ZF 471 495
CAJ82297 C2H2 ZF 501 525
CAJ82297 C2H2 ZF 534 556

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R002402 Calypte anna Aan_R002402 I 0.795
Alligator_sinensis_CCG014457.1 Alligator sinensis Alligator_sinensis_CCG014457.1 I 0.794
ENSAMEG00000004772 Ailuropoda melanoleuca ENSAMEG00000004772 I 0.806
ENSAMXG00000018374 Astyanax mexicanus ENSAMXG00000018374 I 0.783
ENSCHOG00000008313 Choloepus hoffmanni ENSCHOG00000008313 I 0.806
ENSCSAG00000002567 Chlorocebus sabaeus ENSCSAG00000002567 I 0.806
ENSGMOG00000007030 Gadus morhua ENSGMOG00000007030 I 0.790
ENSLACG00000006434 Latimeria chalumnae ENSLACG00000006434 I 0.790
ENSLOCG00000013729 Lepisosteus oculatus ENSLOCG00000013729 I 0.790
ENSMICG00000014053 Microcebus murinus ENSMICG00000014053 I 0.806
ENSMPUG00000015289 Mustela putorius furo ENSMPUG00000015289 I 0.806
ENSNLEG00000002058 Nomascus leucogenys ENSNLEG00000002058 I 0.806
ENSOARG00000007752 Ovis aries ENSOARG00000007752 I 0.806
ENSONIG00000000117 Oreochromis niloticus ENSONIG00000000117 I 0.790
ENSP00000365931 Macaca fascicularis ENSP00000365931 I 0.806
ENSPANG00000022922 Papio anubis ENSPANG00000022922 I 0.806
ENSPFOG00000013068 Poecilia formosa ENSPFOG00000013068 I 0.790
ENSPPYG00000008885 Pongo abelii ENSPPYG00000008885 I 0.806
ENSSHAG00000005633 Sarcophilus harrisii ENSSHAG00000005633 I 0.802
ENSSTOG00000015926 Ictidomys tridecemlineatus ENSSTOG00000015926 I 0.806
ENSXMAG00000014321 Xiphophorus maculatus ENSXMAG00000014321 I 0.790
Myotis_brandtii_SP2_10030436 Myotis brandtii Myotis_brandtii_SP2_10030436 I 0.806
Ogr12593 Ophisaurus gracilis Ogr12593 I 0.794
Pvit_13958 Pogona vitticeps Pvit_13958 I 0.794
sp2 Takifugu rubripes ENSTRUG00000007642 I 0.787
SP2 Procavia capensis ENSPCAG00000002140 I 0.806
SP2 Sorex araneus ENSSARG00000003559 I 0.806
sp2 Tetraodon nigroviridis ENSTNIG00000006290 I 0.787
SP2 Pan troglodytes ENSPTRG00000009342 I 0.806
SP2 Pteropus vampyrus ENSPVAG00000004255 I 0.806
Sp2 Rattus norvegicus ENSRNOG00000010492 I 0.806
SP2 Tursiops truncatus ENSTTRG00000012483 I 0.793
sp2 Oryzias latipes ENSORLG00000000102 I 0.786
SP2 Otolemur garnettii ENSOGAG00000030380 I 0.806
SP2 Felis catus ENSFCAG00000009365 I 0.806
SP2 Echinops telfairi ENSETEG00000009168 I 0.806
SP2 Erinaceus europaeus ENSEEUG00000014248 I 0.806
SP2 Equus caballus ENSECAG00000012859 I 0.806
sp2 Danio rerio ENSDARG00000076763 I 0.786
SP2 Callithrix jacchus ENSCJAG00000007713 I 0.806
SP2 Canis familiaris ENSCAFG00000016812 I 0.806
SP2 Bos taurus ENSBTAG00000013740 I 0.806
SP2 Anolis carolinensis ENSACAG00000006793 I 0.790
SP2 Homo sapiens ENSG00000167182 D 0.806
sp2 Gasterosteus aculeatus ENSGACG00000019811 I 0.790
SP2 Oryctolagus cuniculus ENSOCUG00000027415 I 0.806
SP2 Cavia porcellus ENSCPOG00000014943 I 0.806
Sp2 Mus musculus ENSMUSG00000018678 D 0.806
SP2 Monodelphis domestica ENSMODG00000012452 I 0.779
SP2 Macaca mulatta ENSMMUG00000004765 I 0.806
SP2 Myotis lucifugus ENSMLUG00000005000 I 0.806
SP2 Loxodonta africana ENSLAFG00000021817 I 0.806
SP2 Gorilla gorilla ENSGGOG00000005330 I 0.806
SP2 Gallus gallus ENSGALG00000000233 I 0.795
sp2.S Xenopus laevis XB-GENE-968279 I 0.827