CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf276
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-983669
T145703_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF276
M04495_2.00
Homo sapiens
NWAAGGWSGWVDMKACNHCCTTWAN
NTWAAGGDNGTMKHBWCSWCCTTWN
SELEX
Yin et al.(2017)
ZNF276_eDBD_HT-SELEX
0.816
0.947
ZNF276
M04496_2.00
Homo sapiens
STTAAGGBSGWVWATACYHCCTTAMN
NKTAAGGDRGTATWBWCSVCCTTAAS
SELEX
Yin et al.(2017)
ZNF276_eDBD_Methyl-HT-SELEX
0.816
0.947
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002933710
C2H2 ZF
391
416
YKCPYQGCTAVYRGADGMKKHIKEHH
XP_002933710
C2H2 ZF
423
447
PCPHPGCNKVFMIDRYLQRHVKLIH
XP_002933710
C2H2 ZF
453
475
HICDQCGQAFKQRKHLSVHQMRH
XP_002933710
C2H2 ZF
481
503
LQCEVCGFQCRQRASLKYHMTKH
XP_002933710
C2H2 ZF
511
534
FACDQCAKRFEKAHNLNVHMSMVH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy