glis3 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-984727 T145710_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM

KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.817 0.947
GLIS3
M10169_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.817 0.947
GLIS3
M10170_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.817 0.947
GLIS3
M10171_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.817 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002934220 C2H2 ZF 491 516
XP_002934220 C2H2 ZF 525 552
XP_002934220 C2H2 ZF 559 582
XP_002934220 C2H2 ZF 588 612
XP_002934220 C2H2 ZF 618 642

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action