fezf1.S (Xenopus laevis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-985994 T145716_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN

NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.815 0.986
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN

NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.815 0.986
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT

AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.794 0.891
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT

AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.794 0.891
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN

NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.794 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAF26844 C2H2 ZF 261 283
AAF26844 C2H2 ZF 289 311
AAF26844 C2H2 ZF 317 339
AAF26844 C2H2 ZF 345 367
AAF26844 C2H2 ZF 373 395
AAF26844 C2H2 ZF 401 424

Links

Other C2H2 ZF family TFs
Other Xenopus laevis TFs

Invalid Input OrderBy

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action