XP_002936493 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XP_002936493 T145766_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002936493 C2H2 ZF 445 467
XP_002936493 C2H2 ZF 473 495
XP_002936493 C2H2 ZF 710 731
XP_002936493 C2H2 ZF 737 759
XP_002936493 C2H2 ZF 769 791
XP_002936493 C2H2 ZF 1015 1037
XP_002936493 C2H2 ZF 1043 1065
XP_002936493 C2H2 ZF 1151 1173
XP_002936493 C2H2 ZF 1179 1201

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SALL3 Callithrix jacchus ENSCJAG00000007332 N 0.816
Sall3 Rattus norvegicus ENSRNOG00000026116 N 0.818
SALL3 Sus scrofa ENSSSCG00000004858 N 0.803
sall1a Tetraodon nigroviridis ENSTNIG00000004257 N 0.770
sall1a Takifugu rubripes ENSTRUG00000008950 N 0.770
ENSXMAG00000016273 Xiphophorus maculatus ENSXMAG00000016273 N 0.764
Afo_R009325 Aptenodytes forsteri Afo_R009325 N 0.821
Alligator_sinensis_CCG003694.1 Alligator sinensis Alligator_sinensis_CCG003694.1 N 0.821
Brh_R007854 Buceros rhinoceros Brh_R007854 N 0.821
Cmyd_10010411 Chelonia mydas Cmyd_10010411 N 0.826
ENSP00000299466-D1 Bos grunniens ENSP00000299466-D1 N 0.804
Gfo_R000617 Geospiza fortis Gfo_R000617 N 0.821
Myotis_brandtii_Sall3_10034211 Myotis brandtii Myotis_brandtii_Sall3_10034211 N 0.806
Ogr15828 Ophisaurus gracilis Ogr15828 N 0.821
Tal_R008175 Tyto alba Tal_R008175 N 0.821
sall1 Xenopus tropicalis XB-GENE-491393 N 0.773
sall1.L Xenopus laevis XB-GENE-866060 N 0.773
XP_002936494 Xenopus tropicalis XP_002936494 N 0.827
Sall1 Rattus norvegicus ENSRNOG00000013907 N 0.773
ENSPFOG00000015799 Poecilia formosa ENSPFOG00000015799 N 0.764
SALL3 Procavia capensis ENSPCAG00000006522 N 0.811
ENSCSAG00000018244 Chlorocebus sabaeus ENSCSAG00000018244 N 0.816
SALL3 Dasypus novemcinctus ENSDNOG00000025483 N 0.813
Sall3 Dipodomys ordii ENSDORG00000002702 N 0.784
SALL3 Homo sapiens ENSG00000256463 N 0.816
sall1a Gasterosteus aculeatus ENSGACG00000016702 N 0.764
SALL3 Gorilla gorilla ENSGGOG00000008127 N 0.816
SALL3 Loxodonta africana ENSLAFG00000013521 N 0.814
ENSLOCG00000007283 Lepisosteus oculatus ENSLOCG00000007283 N 0.765
SALL3 Myotis lucifugus ENSMLUG00000010582 N 0.806
SALL3 Macaca mulatta ENSMMUG00000000286 N 0.816
ENSNLEG00000008217 Nomascus leucogenys ENSNLEG00000008217 N 0.784
SALL1 Ornithorhynchus anatinus ENSOANG00000013399 N 0.778
ENSOARG00000004353 Ovis aries ENSOARG00000004353 N 0.792
SALL1 Otolemur garnettii ENSOGAG00000027316 N 0.773
SALL3 Otolemur garnettii ENSOGAG00000031681 N 0.816
ENSONIG00000002831 Oreochromis niloticus ENSONIG00000002831 N 0.770
sall1a Oryzias latipes ENSORLG00000013827 N 0.764
XP_002936495 Xenopus tropicalis XP_002936495 N 0.827