XP_002937184 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XP_002937184 T145774_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hic1
M00141_2.00 		Mus musculus
RTGCCMNBN
NVNKGGCAY		 PBM
Badis et al.(2009)
Hic1_2816 		0.823 0.983
Hic1
M02933_2.00 		Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_1 		0.823 0.983
Hic1
M02934_2.00 		Mus musculus
RTGCCAVCN
NGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_2 		0.823 0.983
Hic1
M09003_2.00 		Mus musculus
KGGCAMCCH
DGGKTGCCM		 Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C 		0.823 0.983
HIC2
M02902_2.00 		Homo sapiens
RTGCCMVNN
NNBKGGCAY		 SELEX
Jolma et al.(2013)
HIC2_1 		0.799 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002937184 C2H2 ZF 387 409
XP_002937184 C2H2 ZF 441 463
XP_002937184 C2H2 ZF 469 491
XP_002937184 C2H2 ZF 497 519
XP_002937184 C2H2 ZF 525 547

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSFALG00000006543 Ficedula albicollis ENSFALG00000006543 I 0.825
ENSLACG00000007028 Latimeria chalumnae ENSLACG00000007028 I 0.825
ENSMGAG00000005397 Meleagris gallopavo ENSMGAG00000005397 I 0.825
ENSGALG00000026718 Gallus gallus ENSGALG00000026718 I 0.825
ENSPSIG00000007902 Pelodiscus sinensis ENSPSIG00000007902 I 0.825
Aan_R003503 Calypte anna Aan_R003503 I 0.825
HIC1 Taeniopygia guttata ENSTGUG00000005835 I 0.825
Afo_R013473 Aptenodytes forsteri Afo_R013473 I 0.825
Hic1 Mus musculus ENSMUSG00000043099 D 0.823
Alligator_sinensis_CCG008952.1 Alligator sinensis Alligator_sinensis_CCG008952.1 I 0.823
HIC1 Cavia porcellus ENSCPOG00000020382 I 0.823
hic1 Gasterosteus aculeatus ENSGACG00000010848 I 0.819
hic1 Takifugu rubripes ENSTRUG00000004590 I 0.819
hic1 Oryzias latipes ENSORLG00000004895 I 0.816
HIC2 Oryctolagus cuniculus ENSOCUG00000010516 I 0.799
HIC2 Procavia capensis ENSPCAG00000015907 I 0.799
HIC2 Otolemur garnettii ENSOGAG00000030274 I 0.799
ENSPPYG00000012022 Pongo abelii ENSPPYG00000012022 I 0.799
Hic2 Rattus norvegicus ENSRNOG00000051458 I 0.799
ENSP00000384889 Macaca fascicularis ENSP00000384889 I 0.799
Myotis_brandtii_HIC2_10021802 Myotis brandtii Myotis_brandtii_HIC2_10021802 I 0.799
ENSSTOG00000006360 Ictidomys tridecemlineatus ENSSTOG00000006360 I 0.799
ENSSSCG00000021196 Sus scrofa ENSSSCG00000021196 I 0.799
HIC2 Pteropus vampyrus ENSPVAG00000000111 I 0.799
Hic2 Mus musculus ENSMUSG00000050240 I 0.799
HIC2 Pan troglodytes ENSPTRG00000014112 I 0.799
ENSPANG00000024301 Papio anubis ENSPANG00000024301 I 0.799
HIC2 Homo sapiens ENSG00000169635 D 0.799
ENSCSAG00000013356 Chlorocebus sabaeus ENSCSAG00000013356 I 0.799
HIC2 Gorilla gorilla ENSGGOG00000006041 I 0.799
HIC2 Canis familiaris ENSCAFG00000032493 I 0.799
HIC2 Felis catus ENSFCAG00000023903 I 0.799
HIC2 Equus caballus ENSECAG00000017997 I 0.799
HIC2 Myotis lucifugus ENSMLUG00000009669 I 0.799
HIC2 Dasypus novemcinctus ENSDNOG00000003162 I 0.799
ENSMPUG00000003198 Mustela putorius furo ENSMPUG00000003198 I 0.799
HIC2 Cavia porcellus ENSCPOG00000001134 I 0.799
Aan_R008211 Calypte anna Aan_R008211 I 0.797
Afo_R001109 Aptenodytes forsteri Afo_R001109 I 0.797
Alligator_sinensis_CCG015471.1 Alligator sinensis Alligator_sinensis_CCG015471.1 I 0.797
Pvit_18806 Pogona vitticeps Pvit_18806 I 0.797
Tal_R003180 Tyto alba Tal_R003180 I 0.797
Ogr08090 Ophisaurus gracilis Ogr08090 I 0.797
ENSAPLG00000002158 Anas platyrhynchos ENSAPLG00000002158 I 0.797
Cmyd_10017824 Chelonia mydas Cmyd_10017824 I 0.797
Gfo_R010813 Geospiza fortis Gfo_R010813 I 0.797
Brh_R005582 Buceros rhinoceros Brh_R005582 I 0.797
HIC2 Taeniopygia guttata ENSTGUG00000008699 I 0.797
ENSPSIG00000000839 Pelodiscus sinensis ENSPSIG00000000839 I 0.797
HIC2 Meleagris gallopavo ENSMGAG00000000949 I 0.797
HIC2 Microcebus murinus ENSMICG00000005154 I 0.797
ENSPSIG00000000992 Pelodiscus sinensis ENSPSIG00000000992 I 0.797
ENSLOCG00000002169 Lepisosteus oculatus ENSLOCG00000002169 I 0.797
ENSGALG00000001403 Gallus gallus ENSGALG00000001403 I 0.797
ENSFALG00000014495 Ficedula albicollis ENSFALG00000014495 I 0.797
hic2 Xenopus tropicalis XB-GENE-960044 I 0.796
ENSONIG00000014335 Oreochromis niloticus ENSONIG00000014335 I 0.791
hic1l Takifugu rubripes ENSTRUG00000013139 I 0.791
ENSPFOG00000020465 Poecilia formosa ENSPFOG00000020465 I 0.791
hic1l Gasterosteus aculeatus ENSGACG00000004268 I 0.791
ENSXMAG00000020311 Xiphophorus maculatus ENSXMAG00000020311 I 0.791
HIC2 Bos taurus ENSBTAG00000005951 I 0.783
HIC1 Anolis carolinensis ENSACAG00000011777 I 0.767