CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002942165
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002942165
T145839_2.00
Misc (2018-Jan-19)
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002942165
C2H2 ZF
155
177
FSCTDCGKCFSHRTILREHRRAH
XP_002942165
C2H2 ZF
212
234
LTCTECGKSFKCKSDLRVHERTH
XP_002942165
C2H2 ZF
240
262
YVCTQCGKGFSQKANLNTHSVIH
XP_002942165
C2H2 ZF
268
290
FSCTECGKCFRLKQCLKSHEKIH
XP_002942165
C2H2 ZF
296
318
FVCTECGKSFNRKFELQKHERTH
XP_002942165
C2H2 ZF
324
346
YVCTQCGKGFSQKVHLESHSLIH
XP_002942165
C2H2 ZF
352
374
FSCAECGKCFRLKQHLKSHEKTH
XP_002942165
C2H2 ZF
380
402
FVCTECGKQFIQKYSLRQHLLIH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found