CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002943396
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002943396
T145872_2.00
Misc (2018-Jan-19)
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002943396
C2H2 ZF
1
21
CTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
27
49
HECTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
55
77
HECTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
83
105
HECTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
111
133
HECTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
139
161
HECTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
167
189
HECTECERSFSSKPRLDKHQRTH
XP_002943396
C2H2 ZF
195
217
HECTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
223
245
HECTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
251
273
HECTECERSFSSKPRLDKHQRTH
XP_002943396
C2H2 ZF
279
301
HECTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
307
329
HECTECERSFSSKPRLDEHQRTH
XP_002943396
C2H2 ZF
335
357
HECTECERSFSSKPRLDKHQRTH
XP_002943396
C2H2 ZF
363
385
HECTEYEKSFQRKQHLKAHYLMH
XP_002943396
C2H2 ZF
391
413
FSCDECGKRFKQRNGLSTHRLSH
XP_002943396
C2H2 ZF
419
441
FVCSECGKSFRAKTDLNYHLNIH
XP_002943396
C2H2 ZF
446
468
FPCTECEESFPSQKHLKRHQMIH
XP_002943396
C2H2 ZF
474
496
YDCTECGKSFRHKSNLDQHNLIH
XP_002943396
C2H2 ZF
502
524
FSCSECGKRFRWKQILQDHQLIH
XP_002943396
C2H2 ZF
530
552
YGCSECGKSYGNKGDLKAHLQRH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found