CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002944641
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002944641
T145894_2.00
Misc (2018-Jan-19)
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002944641
C2H2 ZF
211
233
YICSDCGKSCPCHSAYIRHQRIH
XP_002944641
C2H2 ZF
239
261
YSCTECGKSFIQSSDYNNHVRSH
XP_002944641
C2H2 ZF
267
289
YSCAECGKSFSRSTYLLTHSRTH
XP_002944641
C2H2 ZF
295
317
YKCNVCSKSFGQHSHLALHLRIH
XP_002944641
C2H2 ZF
323
345
YICIECGNSFSRSSTLVKHKKSH
XP_002944641
C2H2 ZF
351
373
YICTYCGKAAPCQSAFLRHQRIH
XP_002944641
C2H2 ZF
379
401
YSCSECGKSFIQSSDYNNHLRSH
XP_002944641
C2H2 ZF
407
429
YTCAECGKGFSRSTYLVTHSRTH
XP_002944641
C2H2 ZF
435
457
YSCTECGKSFVQHSHLTIHLRIH
XP_002944641
C2H2 ZF
463
485
YPCLECGKHFSRSSTLAKHQKSH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found