10503_YHL027W (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 10503_YHL027W T145912_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RIM101
M00030_2.00 		Saccharomyces cerevisiae
BCTTGGCRHN
NDYGCCAAGV		 PBM
Badis et al.(2008)
RIM101_2030 		0.827 1.000
RIM101
M07460_2.00 		Saccharomyces cerevisiae
CTTGGCR
YGCCAAG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0368.1 		0.827 1.000
RIM101
M08529_2.00 		Saccharomyces cerevisiae
TGCCAAG
CTTGGCA		 Misc
DeBoer et al.(2011)
YHL027W_600 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
10503_YHL027W C2H2 ZF 146 171
10503_YHL027W C2H2 ZF 182 206
10503_YHL027W C2H2 ZF 212 234

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action