CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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14324_YLR131C
(
Saccharomyces paradoxus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
14324_YLR131C
T145921_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ACE2
M00033_2.00
Saccharomyces cerevisiae
NTGCTGGBYN
NRVCCAGCAN
PBM
Badis et al.(2008)
ACE2_2082
0.827
0.985
ACE2
M07463_2.00
Saccharomyces cerevisiae
NGCTGGB
VCCAGCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0267.1
0.827
0.985
ACE2
M08534_2.00
Saccharomyces cerevisiae
NGCTGGBH
DVCCAGCN
Misc
DeBoer et al.(2011)
YLR131C_1332
0.827
0.985
SWI5
M00020_2.00
Saccharomyces cerevisiae
NNKGCTGGTHN
NDACCAGCMNN
PBM
Badis et al.(2008)
SWI5_2037
0.797
0.862
SWI5
M07450_2.00
Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0402.1
0.797
0.862
SWI5
M08516_2.00
Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM
Misc
DeBoer et al.(2011)
YDR146C_569
0.797
0.862
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
14324_YLR131C
C2H2 ZF
602
626
FECLYPNCSKVFKRRYNIRSHIQTH
14324_YLR131C
C2H2 ZF
632
656
YSCDFPGCTKAFVRNHDLIRHKISH
14324_YLR131C
C2H2 ZF
663
681
CPCGKRFNREDALMVHRSR
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces paradoxus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy