CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

16604_YMR182C *(Saccharomyces paradoxus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	16604_YMR182C	T145931_2.00	Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
RGM1 M00037_2.00	Saccharomyces cerevisiae	NCCCCTGR	YCAGGGGN	PBM Badis et al.(2008) RGM1_2105	0.797	0.978
RGM1 M07467_2.00	Saccharomyces cerevisiae	CCCCT	AGGGG	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0366.1	0.797	0.978
RGM1 M08540_2.00	Saccharomyces cerevisiae	CCCCT	AGGGG	Misc DeBoer et al.(2011) YMR182C_531	0.797	0.978
KTB10507.1 M01040_2.00	Candida glabrata	NBCCCTKR	YMAGGGVN	PBM Siggers et al.(2014) CAGL0L00583gCgla	0.763	0.739
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
16604_YMR182C	C2H2 ZF	19	44	YRCVGYPDCNMSFNRAEHLARHIRKH
16604_YMR182C	C2H2 ZF	50	73	FQCNICLKFFSRIDNLRQHQSSVH

Links
Other C2H2 ZF family TFs
Other *Saccharomyces paradoxus* TFs