18960_YMR182C (Saccharomyces bayanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 18960_YMR182C T145942_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RGM1
M00037_2.00
Saccharomyces cerevisiae
NCCCCTGR

YCAGGGGN
PBM
Badis et al.(2008)
RGM1_2105
0.797 0.978
RGM1
M07467_2.00
Saccharomyces cerevisiae
CCCCT

AGGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0366.1
0.797 0.978
RGM1
M08540_2.00
Saccharomyces cerevisiae
CCCCT

AGGGG
Misc
DeBoer et al.(2011)
YMR182C_531
0.797 0.978
KTB10507.1
M01040_2.00
Candida glabrata
NBCCCTKR

YMAGGGVN
PBM
Siggers et al.(2014)
CAGL0L00583gCgla
0.763 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
18960_YMR182C C2H2 ZF 19 44
18960_YMR182C C2H2 ZF 50 73

Links

Other C2H2 ZF family TFs
Other Saccharomyces bayanus TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
17088_YMR182C Saccharomyces mikatae 17088_YMR182C I 0.827
16604_YMR182C Saccharomyces paradoxus 16604_YMR182C I 0.827
RGM1 Saccharomyces cerevisiae YMR182C D 0.797
KTB10507.1 Candida glabrata KTB10507.1 D 0.763
SAKL0A03476g Lachancea kluyveri SAKL0A03476g I 0.757