19232_YNL027W (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 19232_YNL027W T145943_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CRZ1
M00038_2.00
Saccharomyces cerevisiae
NNDCTRHGCCNN

NNGGCDYAGHNN
PBM
Badis et al.(2008)
CRZ1_4531
0.827 1.000
CRZ1
M07468_2.00
Saccharomyces cerevisiae
NNVMGCCHC

GDGGCKBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0285.1
0.827 1.000
CRZ1
M08541_2.00
Saccharomyces cerevisiae
NNVMGCCHC

GDGGCKBNN
Misc
DeBoer et al.(2011)
YNL027W_516
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
19232_YNL027W C2H2 ZF 562 584
19232_YNL027W C2H2 ZF 590 612
19232_YNL027W C2H2 ZF 618 648

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action