CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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20252_YOR113W
(
Saccharomyces mikatae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
20252_YOR113W
T145944_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AZF1
M00039_2.00
Saccharomyces cerevisiae
YNNHNNNNNN
NNNNNNDNNR
PBM
Badis et al.(2008)
AZF1_2102
0.827
1.000
AZF1
M07469_2.00
Saccharomyces cerevisiae
NTTCTTTTN
NAAAAGAAN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0277.1
0.827
1.000
AZF1
M08542_2.00
Saccharomyces cerevisiae
BTTCTTTTB
VAAAAGAAV
Misc
DeBoer et al.(2011)
YOR113W_499
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
20252_YOR113W
C2H2 ZF
583
605
HECPYCHRLFSQATHLEVHVRSH
20252_YOR113W
C2H2 ZF
611
633
FVCDYCGKRFTQGGNLRTHERLH
20252_YOR113W
C2H2 ZF
639
661
YSCDICDKKFSRKGNLAAHLVTH
20252_YOR113W
C2H2 ZF
667
692
FVCKLENCNKTFTQLGNMKAHQNRFH
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces mikatae
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy