CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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20760_YOR113W
(
Saccharomyces paradoxus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
20760_YOR113W
T145945_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AZF1
M00039_2.00
Saccharomyces cerevisiae
YNNHNNNNNN
NNNNNNDNNR
PBM
Badis et al.(2008)
AZF1_2102
0.827
1.000
AZF1
M07469_2.00
Saccharomyces cerevisiae
NTTCTTTTN
NAAAAGAAN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0277.1
0.827
1.000
AZF1
M08542_2.00
Saccharomyces cerevisiae
BTTCTTTTB
VAAAAGAAV
Misc
DeBoer et al.(2011)
YOR113W_499
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
20760_YOR113W
C2H2 ZF
586
608
HECPYCHRLFSQATHLEVHVRSH
20760_YOR113W
C2H2 ZF
614
636
FVCDYCGKRFTQGGNLRTHERLH
20760_YOR113W
C2H2 ZF
642
664
YSCDICDKKFSRKGNLAAHLVTH
20760_YOR113W
C2H2 ZF
670
695
FVCKLENCNKTFTQLGNMKAHQNRFH
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces paradoxus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy