25590_YPR013C (Saccharomyces bayanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 25590_YPR013C T145964_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CMR3
M00042_2.00
Saccharomyces cerevisiae
HGTARATCN

NGATYTACD
PBM
Badis et al.(2008)
YPR013C_2104
0.827 0.978
CMR3
M01539_2.00
Saccharomyces cerevisiae
NGATYDRCVN

NBGYHRATCN
PBM
Zhu et al.(2009)
Ypr013c
0.827 0.978
CMR3
M07471_2.00
Saccharomyces cerevisiae
NGATYKRCR

YGYMRATCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1
0.827 0.978
CMR3
M08545_2.00
Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN

NNNNHRKGATYTACRBYNNN
Misc
DeBoer et al.(2011)
YPR013C_859
0.827 0.978
YPR015C
M01540_2.00
Saccharomyces cerevisiae
YTSBBBN

NVVVSAR
PBM
Zhu et al.(2009)
Ypr015c
0.776 0.848
YPR015C
M08546_2.00
Saccharomyces cerevisiae
BNNNDVCGTAAATCMYNDHH

DDHNRKGATTTACGBHNNNV
Misc
DeBoer et al.(2011)
YPR015C_871
0.776 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
25590_YPR013C C2H2 ZF 254 276
25590_YPR013C C2H2 ZF 282 306

Links

Other C2H2 ZF family TFs
Other Saccharomyces bayanus TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action