3158_YDL020C (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 3158_YDL020C T145969_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RPN4
M00017_2.00 		Saccharomyces cerevisiae
NNCGCCACCN
NGGTGGCGNN		 PBM
Badis et al.(2008)
RPN4_2137 		0.821 0.976
RPN4
M01525_2.00 		Saccharomyces cerevisiae
NWWWWWWWWN
NWWWWWWWWN		 PBM
Zhu et al.(2009)
Rpn4 		0.821 0.976
RPN4
M07447_2.00 		Saccharomyces cerevisiae
CGCCACY
RGTGGCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0373.1 		0.821 0.976
RPN4
M08511_2.00 		Saccharomyces cerevisiae
NNNRGTGGCRAM
KTYGCCACYNNN		 Misc
DeBoer et al.(2011)
YDL020C_1700 		0.821 0.976
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
3158_YDL020C C2H2 ZF 468 487
3158_YDL020C C2H2 ZF 494 526

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RPN4 Saccharomyces cerevisiae YDL020C D 0.821
3679_YDL020C Saccharomyces paradoxus 3679_YDL020C I 0.821
ZBAI_02149 Zygosaccharomyces bailii ZBAI_02149 I 0.821
ZBAI_08006 Zygosaccharomyces bailii ZBAI_08006 I 0.821
ZYRO0A05302g Zygosaccharomyces rouxii ZYRO0A05302g I 0.821
TDEL_0D04500 Torulaspora delbrueckii TDEL_0D04500 I 0.821
SKUD_186708 Saccharomyces kudriavzevii SKUD_186708 I 0.821
KAFR_0F02260 Kazachstania africana KAFR_0F02260 I 0.821
3988_YDL020C Saccharomyces bayanus 3988_YDL020C I 0.821
NCAS_0I01820 Naumovozyma castellii NCAS_0I01820 I 0.821
NDAI_0A06440 Naumovozyma dairenensis NDAI_0A06440 I 0.821
Scas_Contig718.67 Saccharomyces castellii Scas_Contig718.67 I 0.821
TPHA_0H00790 Tetrapisispora phaffii TPHA_0H00790 I 0.791
KAFR_0C00960 Kazachstania africana KAFR_0C00960 I 0.782
KNAG_0K01703 Kazachstania naganishii KNAG_0K01703 I 0.780