3580_YDR146C (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 3580_YDR146C T145973_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SWI5
M00020_2.00
Saccharomyces cerevisiae
NNKGCTGGTHN

NDACCAGCMNN
PBM
Badis et al.(2008)
SWI5_2037
0.823 0.968
SWI5
M07450_2.00
Saccharomyces cerevisiae
KGCTGGKH

DMCCAGCM
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0402.1
0.823 0.968
SWI5
M08516_2.00
Saccharomyces cerevisiae
KGCTGGKH

DMCCAGCM
Misc
DeBoer et al.(2011)
YDR146C_569
0.823 0.968
ACE2
M00033_2.00
Saccharomyces cerevisiae
NTGCTGGBYN

NRVCCAGCAN
PBM
Badis et al.(2008)
ACE2_2082
0.797 0.889
ACE2
M07463_2.00
Saccharomyces cerevisiae
NGCTGGB

VCCAGCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0267.1
0.797 0.889
ACE2
M08534_2.00
Saccharomyces cerevisiae
NGCTGGBH

DVCCAGCN
Misc
DeBoer et al.(2011)
YLR131C_1332
0.797 0.889
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
3580_YDR146C C2H2 ZF 480 504
3580_YDR146C C2H2 ZF 510 534
3580_YDR146C C2H2 ZF 543 559

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
14324_YLR131C Saccharomyces paradoxus 14324_YLR131C I 0.797
16206_YLR131C Saccharomyces bayanus 16206_YLR131C I 0.777
4131_Multiple Saccharomyces bayanus 4131_Multiple I 0.823
4284_YDR146C Saccharomyces paradoxus 4284_YDR146C I 0.823
CAGL0E01331g Candida glabrata CAGL0E01331g I 0.774
KAFR_0B05740 Kazachstania africana KAFR_0B05740 I 0.774
KLTH0G12254g Lachancea thermotolerans KLTH0G12254g I 0.757
KLTH0G12254g Kluyveromyces thermotolerans KLTH0G12254g I 0.757
KNAG_0A05170 Kazachstania naganishii KNAG_0A05170 I 0.785
Kpol_1036p70 Vanderwaltozyma polyspora Kpol_1036p70 I 0.778
Kwal_23925 Kluyveromyces waltii Kwal_23925 I 0.761
NCAS_0B03600 Naumovozyma castellii NCAS_0B03600 I 0.770
NDAI_0J00990 Naumovozyma dairenensis NDAI_0J00990 I 0.774
Scas_Contig693.31 Saccharomyces castellii Scas_Contig693.31 I 0.770
SU7_2211 Saccharomyces arboricola SU7_2211 I 0.781
TDEL_0F04510 Torulaspora delbrueckii TDEL_0F04510 I 0.778
SWI5 Saccharomyces cerevisiae YDR146C D 0.823
ACE2 Saccharomyces cerevisiae YLR131C D 0.797