3987_YDR253C (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 3987_YDR253C T145979_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MET32
M00022_2.00 		Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN		 PBM
Badis et al.(2008)
MET32_2153 		0.827 1.000
MET32
M01528_2.00 		Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK		 PBM
Zhu et al.(2009)
Met32 		0.827 1.000
MET32
M07452_2.00 		Saccharomyces cerevisiae
MGCCACM
KGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1 		0.827 1.000
MET32
M08518_2.00 		Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB		 Misc
DeBoer et al.(2011)
YDR253C_1375 		0.827 1.000
MET31
M00040_2.00 		Saccharomyces cerevisiae
NNHCACCTMN
NKAGGTGDNN		 PBM
Badis et al.(2008)
MET31_2146 		0.773 0.795
MET31
M07470_2.00 		Saccharomyces cerevisiae
MGCCACNNH
DNNGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0333.1 		0.773 0.795
MET31
M08543_2.00 		Saccharomyces cerevisiae
VCACWVYK
MRBWGTGB		 Misc
DeBoer et al.(2011)
YPL038W_1370 		0.773 0.795
MET31
M10402_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MET31_01 		0.773 0.795
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
3987_YDR253C C2H2 ZF 98 120
3987_YDR253C C2H2 ZF 127 147

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MET32 Saccharomyces cerevisiae YDR253C D 0.827
4678_YDR253C Saccharomyces paradoxus 4678_YDR253C I 0.827
SKUD_191509 Saccharomyces kudriavzevii SKUD_191509 I 0.803
KAFR_0E02900 Kazachstania africana KAFR_0E02900 I 0.803
NDAI_0C05210 Naumovozyma dairenensis NDAI_0C05210 I 0.801
TPHA_0L01320 Tetrapisispora phaffii TPHA_0L01320 I 0.791
ZYRO0F08162g Zygosaccharomyces rouxii ZYRO0F08162g I 0.788
ZBAI_05898 Zygosaccharomyces bailii ZBAI_05898 I 0.788
ZBAI_00597 Zygosaccharomyces bailii ZBAI_00597 I 0.788
Scas_Contig568.5 Saccharomyces castellii Scas_Contig568.5 I 0.773
NCAS_0B02480 Naumovozyma castellii NCAS_0B02480 I 0.773
Scas_Contig721.56 Saccharomyces castellii Scas_Contig721.56 I 0.773
23564_YPL038W Saccharomyces paradoxus 23564_YPL038W I 0.773
Kwal_11824 Kluyveromyces waltii Kwal_11824 I 0.773
25018_YPL038W Saccharomyces bayanus 25018_YPL038W I 0.773
MET31 Saccharomyces cerevisiae YPL038W D 0.773
NCAS_0C02430 Naumovozyma castellii NCAS_0C02430 I 0.773
SKUD_139603 Saccharomyces kudriavzevii SKUD_139603 I 0.773
SU7_3598 Saccharomyces arboricola SU7_3598 I 0.773
LALA0_S04e04720g Lachancea lanzarotensis LALA0_S04e04720g I 0.767
SAKL0H11440g Lachancea kluyveri SAKL0H11440g I 0.767
KLTH0E11330g Kluyveromyces thermotolerans KLTH0E11330g I 0.767
KLTH0E11330g Lachancea thermotolerans KLTH0E11330g I 0.767
KLLA0_D11902g Kluyveromyces lactis KLLA0_D11902g I 0.766
22143_YPL038W Saccharomyces mikatae 22143_YPL038W I 0.763
HPODL_01443 Ogataea parapolymorpha HPODL_01443 I 0.762
BN7_573 Wickerhamomyces ciferrii BN7_573 I 0.761
TBLA_0A00350 Tetrapisispora blattae TBLA_0A00350 I 0.761
XP_002489513.1 Pichia pastoris XP_002489513.1 I 0.758
PAS_chr1-3_0170 Komagataella pastoris PAS_chr1-3_0170 I 0.758