4284_YDR146C (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 4284_YDR146C T145984_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SWI5
M00020_2.00 		Saccharomyces cerevisiae
NNKGCTGGTHN
NDACCAGCMNN		 PBM
Badis et al.(2008)
SWI5_2037 		0.827 0.984
SWI5
M07450_2.00 		Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0402.1 		0.827 0.984
SWI5
M08516_2.00 		Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM		 Misc
DeBoer et al.(2011)
YDR146C_569 		0.827 0.984
ACE2
M00033_2.00 		Saccharomyces cerevisiae
NTGCTGGBYN
NRVCCAGCAN		 PBM
Badis et al.(2008)
ACE2_2082 		0.797 0.889
ACE2
M07463_2.00 		Saccharomyces cerevisiae
NGCTGGB
VCCAGCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0267.1 		0.797 0.889
ACE2
M08534_2.00 		Saccharomyces cerevisiae
NGCTGGBH
DVCCAGCN		 Misc
DeBoer et al.(2011)
YLR131C_1332 		0.797 0.889
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
4284_YDR146C C2H2 ZF 550 574
4284_YDR146C C2H2 ZF 580 604
4284_YDR146C C2H2 ZF 613 629

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
4131_Multiple Saccharomyces bayanus 4131_Multiple I 0.827
SWI5 Saccharomyces cerevisiae YDR146C D 0.827
3580_YDR146C Saccharomyces mikatae 3580_YDR146C I 0.823
14324_YLR131C Saccharomyces paradoxus 14324_YLR131C I 0.797
ACE2 Saccharomyces cerevisiae YLR131C D 0.797
KNAG_0A05170 Kazachstania naganishii KNAG_0A05170 I 0.781
SU7_2211 Saccharomyces arboricola SU7_2211 I 0.781
TDEL_0F04510 Torulaspora delbrueckii TDEL_0F04510 I 0.778
Kpol_1036p70 Vanderwaltozyma polyspora Kpol_1036p70 I 0.778
16206_YLR131C Saccharomyces bayanus 16206_YLR131C I 0.777
KAFR_0B05740 Kazachstania africana KAFR_0B05740 I 0.774
CAGL0E01331g Candida glabrata CAGL0E01331g I 0.774
NDAI_0J00990 Naumovozyma dairenensis NDAI_0J00990 I 0.774
NCAS_0B03600 Naumovozyma castellii NCAS_0B03600 I 0.770
Scas_Contig693.31 Saccharomyces castellii Scas_Contig693.31 I 0.770
Kwal_23925 Kluyveromyces waltii Kwal_23925 I 0.761
KLTH0G12254g Kluyveromyces thermotolerans KLTH0G12254g I 0.757
KLTH0G12254g Lachancea thermotolerans KLTH0G12254g I 0.757