4550_YDR216W (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 4550_YDR216W T145987_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ADR1
M00021_2.00 		Saccharomyces cerevisiae
NACCCCRCHN
NDGYGGGGTN		 PBM
Badis et al.(2008)
ADR1_4492 		0.827 1.000
ADR1
M07451_2.00 		Saccharomyces cerevisiae
NCCCCRM
KYGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0268.1 		0.827 1.000
ADR1
M08517_2.00 		Saccharomyces cerevisiae
NCCCCRM
KYGGGGN		 Misc
DeBoer et al.(2011)
YDR216W_576 		0.827 1.000
ADR1
M10388_2.00 		Saccharomyces cerevisiae
MCYCCD
HGGRGK		 Transfac
Matys et al.(2006)
F$ADR1_01 		0.827 1.000
ADR1
M10389_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ADR1_Q6 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
4550_YDR216W C2H2 ZF 104 126
4550_YDR216W C2H2 ZF 132 155

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
4112_Multiple Saccharomyces mikatae 4112_Multiple I 0.827
SU7_2617 Saccharomyces arboricola SU7_2617 I 0.827
ADR1 Saccharomyces cerevisiae YDR216W D 0.827
4528_Multiple Saccharomyces bayanus 4528_Multiple I 0.827
KLLA0_F13046g Kluyveromyces lactis KLLA0_F13046g I 0.772
NDAI_0C04860 Naumovozyma dairenensis NDAI_0C04860 I 0.770
XP_002493922.1 Pichia pastoris XP_002493922.1 I 0.766
PAS_chr4_0487 Komagataella pastoris PAS_chr4_0487 I 0.766
KUCA_T00002767001 Kuraishia capsulata KUCA_T00002767001 I 0.766
KNAG_0M00350 Kazachstania naganishii KNAG_0M00350 I 0.757
AWRI1499_1053 Brettanomyces bruxellensis AWRI1499_1053 I 0.757