5542_YDR463W (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 5542_YDR463W T145992_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STP1
M00910_2.00 		Saccharomyces cerevisiae
NYACGGCRCN
NGYGCCGTRN		 PBM
Gordan et al.(2011)
Stp1 		0.827 1.000
STP1
M08414_2.00 		Saccharomyces cerevisiae
BGCGGCKB
VMGCCGCV		 ChIP-chip
Mathelier et al.(2014)
MA0394.1 		0.827 1.000
STP1
M08519_2.00 		Saccharomyces cerevisiae
YRCGGCKB
VMGCCGYR		 Misc
DeBoer et al.(2011)
YDR463W_660 		0.827 1.000
STP1
M10390_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STP1_01 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
5542_YDR463W C2H2 ZF 160 182

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
5271_YDR463W Saccharomyces mikatae 5271_YDR463W I 0.827
KNAG_0B03350 Kazachstania naganishii KNAG_0B03350 I 0.827
SU7_2774 Saccharomyces arboricola SU7_2774 I 0.827
5582_YDR463W Saccharomyces bayanus 5582_YDR463W I 0.827
STP1 Saccharomyces cerevisiae YDR463W D 0.827
23216_YHR006W Saccharomyces bayanus 23216_YHR006W I 0.825
KAFR_0C05710 Kazachstania africana KAFR_0C05710 I 0.807
Kpol_1023p63 Vanderwaltozyma polyspora Kpol_1023p63 I 0.779
AACERI_AaceriAFR461C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR461C I 0.779
TDEL_0A04530 Torulaspora delbrueckii TDEL_0A04530 I 0.779
AGOS_AFR461C Ashbya gossypii AGOS_AFR461C I 0.779
SAKL0G06292g Lachancea kluyveri SAKL0G06292g I 0.779
NDAI_0C00690 Naumovozyma dairenensis NDAI_0C00690 I 0.779
SKUD_206715 Saccharomyces kudriavzevii SKUD_206715 I 0.779
TPHA_0K00210 Tetrapisispora phaffii TPHA_0K00210 I 0.779
Ecym_1404 Eremothecium cymbalariae Ecym_1404 I 0.779
CAGL0E04312g Candida glabrata CAGL0E04312g I 0.779
Kwal_18337 Kluyveromyces waltii Kwal_18337 I 0.779
SU7_1409 Saccharomyces arboricola SU7_1409 I 0.779
KLTH0G05104g Kluyveromyces thermotolerans KLTH0G05104g I 0.779
KAFR_0A06720 Kazachstania africana KAFR_0A06720 I 0.779
KLTH0G05104g Lachancea thermotolerans KLTH0G05104g I 0.779
KNAG_0C06030 Kazachstania naganishii KNAG_0C06030 I 0.776
KLLA0_F10109g Kluyveromyces lactis KLLA0_F10109g I 0.776
KUCA_T00002785001 Kuraishia capsulata KUCA_T00002785001 I 0.767
Ecym_1475 Eremothecium cymbalariae Ecym_1475 I 0.764
AGOS_AFR531W Ashbya gossypii AGOS_AFR531W I 0.764
AACERI_AaceriAFR531W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR531W I 0.764
DEHA2E16478g Debaryomyces hansenii DEHA2E16478g I 0.757
CORT_0D02790 Candida orthopsilosis CORT_0D02790 I 0.757
GNLVRS01_PISO0M20868g Millerozyma farinosa GNLVRS01_PISO0M20868g I 0.757
GNLVRS01_PISO0N21111g Millerozyma farinosa GNLVRS01_PISO0N21111g I 0.757
estExt_fgenesh1_pg.C_chr_1.20297 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20297 I 0.757
PICST_66679 Scheffersomyces stipitis PICST_66679 I 0.757