6484_YER130C (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 6484_YER130C T146000_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
COM2
M00024_2.00 		Saccharomyces cerevisiae
VCCCCTDT
AHAGGGGB		 PBM
Badis et al.(2008)
YER130C_2103 		0.827 1.000
COM2
M01530_2.00 		Saccharomyces cerevisiae
YYYYKNWHN
NDWNMRRRR		 PBM
Zhu et al.(2009)
Yer130c 		0.827 1.000
COM2
M07454_2.00 		Saccharomyces cerevisiae
NCCCCTWTH
DAWAGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0423.1 		0.827 1.000
COM2
M08521_2.00 		Saccharomyces cerevisiae
NCCCCTWTH
DAWAGGGGN		 Misc
DeBoer et al.(2011)
YER130C_534 		0.827 1.000
KLLA0_C17072g
M01038_2.00 		Kluyveromyces lactis
CYCCTDDNN
NNHHAGGRG		 PBM
Siggers et al.(2014)
KLL0C17072gKlac 		0.771 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
6484_YER130C C2H2 ZF 397 420
6484_YER130C C2H2 ZF 426 448

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COM2 Saccharomyces cerevisiae YER130C D 0.827
6354_YER130C Saccharomyces mikatae 6354_YER130C I 0.827
SU7_0930 Saccharomyces arboricola SU7_0930 I 0.827
6723_YER130C Saccharomyces bayanus 6723_YER130C I 0.827
TDEL_0B04670 Torulaspora delbrueckii TDEL_0B04670 I 0.803
CAGL0K02145g Candida glabrata CAGL0K02145g I 0.803
NDAI_0B01930 Naumovozyma dairenensis NDAI_0B01930 I 0.801
Ecym_8403 Eremothecium cymbalariae Ecym_8403 I 0.798
SAKL0H24816g Lachancea kluyveri SAKL0H24816g I 0.798
ZYRO0G19140g Zygosaccharomyces rouxii ZYRO0G19140g I 0.797
KNAG_0D02120 Kazachstania naganishii KNAG_0D02120 I 0.796
AGOS_ACL057W Ashbya gossypii AGOS_ACL057W I 0.792
AACERI_AaceriACL057W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACL057W I 0.792
ZBAI_08232 Zygosaccharomyces bailii ZBAI_08232 I 0.781
LALA0_S01e12970g Lachancea lanzarotensis LALA0_S01e12970g I 0.779
KNAG_0G01280 Kazachstania naganishii KNAG_0G01280 I 0.777
Kwal_17241 Kluyveromyces waltii Kwal_17241 I 0.774
Kpol_1031p42 Vanderwaltozyma polyspora Kpol_1031p42 I 0.773
KAFR_0B02160 Kazachstania africana KAFR_0B02160 I 0.773
TPHA_0D01050 Tetrapisispora phaffii TPHA_0D01050 I 0.772
KLLA0_C17072g Kluyveromyces lactis KLLA0_C17072g D 0.771
KLTH0E06688g Lachancea thermotolerans KLTH0E06688g I 0.769
KLTH0E06688g Kluyveromyces thermotolerans KLTH0E06688g I 0.769
NDAI_0G03420 Naumovozyma dairenensis NDAI_0G03420 I 0.761