7577_YGL209W (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 7577_YGL209W T146006_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MIG2
M00027_2.00
Saccharomyces cerevisiae
NNCCCCRBNN

NNVYGGGGNN
PBM
Badis et al.(2008)
MIG2_2053
0.827 1.000
MIG2
M01533_2.00
Saccharomyces cerevisiae
NNCCCCRCNN

NNGYGGGGNN
PBM
Zhu et al.(2009)
Mig2
0.827 1.000
MIG2
M07457_2.00
Saccharomyces cerevisiae
CCCCRCN

NGYGGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0338.1
0.827 1.000
MIG2
M08525_2.00
Saccharomyces cerevisiae
CCCCRCN

NGYGGGG
Misc
DeBoer et al.(2011)
YGL209W_523
0.827 1.000
MIG2
M10394_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG2_02
0.827 1.000
MIG3
M00023_2.00
Saccharomyces cerevisiae
NNCCCCGCAH

DTGCGGGGNN
PBM
Badis et al.(2008)
MIG3_2054
0.787 0.826
MIG3
M01529_2.00
Saccharomyces cerevisiae
CYCCRBNNN

NNNVYGGRG
PBM
Zhu et al.(2009)
Mig3
0.787 0.826
MIG3
M07453_2.00
Saccharomyces cerevisiae
CCCCRCN

NGYGGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0339.1
0.787 0.826
MIG3
M08520_2.00
Saccharomyces cerevisiae
CCCCRCN

NGYGGGG
Misc
DeBoer et al.(2011)
YER028C_501
0.787 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
7577_YGL209W C2H2 ZF 17 39
7577_YGL209W C2H2 ZF 45 69

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action