CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_50387
(
Cryphonectria parasitica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pm.C_50387
T146167_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
msn-1
M01192_2.00
Neurospora crassa
VCCCCTDW
WHAGGGGB
PBM
Lambert et al.(2019)
pTH8923
0.767
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_50387
C2H2 ZF
418
441
FVCELCNRRFRRQEHLKRHYRSLH
estExt_fgenesh1_pm.C_50387
C2H2 ZF
447
469
FECNECGKKFSRSDNLTQHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Cryphonectria parasitica
TFs
145 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy