estExt_Genewise1Plus.C_90390 (Cryphonectria parasitica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_Genewise1Plus.C_90390 T146197_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.810 0.946
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.804 0.924
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_90390 C2H2 ZF 26 48
estExt_Genewise1Plus.C_90390 C2H2 ZF 54 78
estExt_Genewise1Plus.C_90390 C2H2 ZF 84 106
estExt_Genewise1Plus.C_90390 C2H2 ZF 112 136

Links

Other C2H2 ZF family TFs
Other Cryphonectria parasitica TFs

Invalid Input OrderBy

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action