CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc13467
(
Meloidogyne incognita
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Minc13467
T146457_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc13467
C2H2 ZF
426
448
TKCPLCEMEFSNIFRLNEHIRLH
Minc13467
C2H2 ZF
451
473
HSCDTCQKTFMTAFDLNLHMGTH
Minc13467
C2H2 ZF
478
500
YDCKDCGKCFPCRKTLAEHNRSH
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne incognita
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
genemark-nMf.1.1.scaf00614-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf00614-processed-gene-0.3
N
0.827
MhA1_Contig343.frz3.gene9
Meloidogyne hapla
MhA1_Contig343.frz3.gene9
N
0.803
GPLIN_000681800
Globodera pallida
GPLIN_000681800
N
0.766