CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc18911
(
Meloidogyne incognita
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Minc18911
T146481_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc18911
C2H2 ZF
99
119
IKCSFCPKKLPGQNALQLHLE
Minc18911
C2H2 ZF
127
149
HECDLCGKRFKARGGLQQHNRIH
Minc18911
C2H2 ZF
155
177
YMCHYCPKRFTQKSHVDQHERIH
Minc18911
C2H2 ZF
183
205
FACQFCGRQFRQRSQQLGHEATH
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne incognita
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf04301-augustus-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf04301-augustus-gene-0.7
N
0.827
genemark-nMf.1.1.scaf15253-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf15253-processed-gene-0.1
N
0.810
MhA1_Contig627.frz3.gene1
Meloidogyne hapla
MhA1_Contig627.frz3.gene1
N
0.769