CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pc22g25580
(
Penicillium chrysogenum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pc22g25580
T146546_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.790
0.870
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.778
0.899
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.778
0.899
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc22g25580.t1
C2H2 ZF
358
383
YKCTHPGCTAAPFQTQYLLNSHANVH
Pc22g25580.t1
C2H2 ZF
389
418
HFCPVEGCPRALGGKGFKRKNEMMRHGLVH
Pc22g25580.t1
C2H2 ZF
423
449
YVCPFCPDQQHKYPRPDNLQRHVRVHH
Links
Other
C2H2 ZF
family TFs
Other
Penicillium chrysogenum
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy