CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_025670
(
Penicillium marneffei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PMAA_025670
T146579_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_02507
M01447_2.00
Histoplasma capsulatum
NNCCCCTKD
HMAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10217
0.827
1.000
NCU05064
M01883_2.00
Neurospora crassa
NNYMCCTKD
HMAGGKRNN
PBM
Weirauch et al.(2014)
pTH8949
0.803
0.933
CaO19.723
M01037_2.00
Candida albicans
VCCCCTKD
HMAGGGGB
PBM
Siggers et al.(2014)
Bcr1_Orf19.723Calb
0.760
0.778
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_025670.t1
C2H2 ZF
98
123
FFCTDFPPCTLSFTRSEHLARHIRKH
PMAA_025670.t1
C2H2 ZF
129
151
FQCHCSRRFSRLDNLRQHAQTVH
Links
Other
C2H2 ZF
family TFs
Other
Penicillium marneffei
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy