PMAA_040270 (Penicillium marneffei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 PMAA_040270 T146591_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.813 0.957
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.788 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_040270.t1 C2H2 ZF 118 140
PMAA_040270.t1 C2H2 ZF 146 170
PMAA_040270.t1 C2H2 ZF 176 198
PMAA_040270.t1 C2H2 ZF 204 228

Links

Other C2H2 ZF family TFs
Other Penicillium marneffei TFs

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130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action