CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_051070
(
Penicillium marneffei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PMAA_051070
T146599_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.791
0.870
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.791
0.870
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.790
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_051070.t1
C2H2 ZF
443
468
YKCSYPGCTAGAFQTQYLLNSHANVH
PMAA_051070.t1
C2H2 ZF
474
503
HFCPVAGCPRGIGGKGFKRKNEMIRHGLVH
PMAA_051070.t1
C2H2 ZF
508
534
YVCPFCTDQQHKYPRPDNLQRHVRVHH
Links
Other
C2H2 ZF
family TFs
Other
Penicillium marneffei
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy