PMAA_059470 (Penicillium marneffei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 PMAA_059470 T146607_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FGRRES_01877
M01175_2.00
Fusarium graminearum
NNNRGCTGNN

NNCAGCYNNN
PBM
Lambert et al.(2019)
pTH10260
0.811 0.917
NCU03699
M01878_2.00
Neurospora crassa
NNVRGCTGDN

NHCAGCYBNN
PBM
Weirauch et al.(2014)
pTH8956
0.810 0.917
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_059470.t1 C2H2 ZF 274 294
PMAA_059470.t1 C2H2 ZF 301 327
PMAA_059470.t1 C2H2 ZF 332 362
PMAA_059470.t1 C2H2 ZF 397 416

Links

Other C2H2 ZF family TFs
Other Penicillium marneffei TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT3G54390 Arabidopsis thaliana AT3G54390 N 0.000
Pm016744 Prunus mume Pm016744 N 0.000
Aquca_004_00804 Aquilegia coerulea Aquca_004_00804 N 0.000
Bostr.0697s0050 Boechera stricta Bostr.0697s0050 N 0.000
Cagra.0562s0030 Capsella grandiflora Cagra.0562s0030 N 0.000
Carubv10019255m.g Capsella rubella Carubv10019255m.g N 0.000
Ciclev10001759m.g Citrus clementina Ciclev10001759m.g N 0.000
MDP0000123719 Malus domestica MDP0000123719 N 0.000
MDP0000727700 Malus domestica MDP0000727700 N 0.000
SapurV1A.0009s1160 Salix purpurea SapurV1A.0009s1160 N 0.000
SapurV1A.0574s0200 Salix purpurea SapurV1A.0574s0200 N 0.000
Cla010096 Citrullus lanatus Cla010096 N 0.000
VIT_13s0084g00800 Vitis vinifera VIT_13s0084g00800 N 0.000
Solyc01g096470.2 Solanum lycopersicum Solyc01g096470.2 N 0.000
Bo8g068640 Brassica oleracea Bo8g068640 N 0.000
Bo8g083630 Brassica oleracea Bo8g083630 N 0.000
Bra007069 Brassica rapa Bra007069 N 0.000
fgenesh2_kg.5__1832__AT3G54390.1 Arabidopsis lyrata fgenesh2_kg.5__1832__AT3G54390.1 N 0.000
GLYMA11G25570 Glycine max GLYMA11G25570 N 0.000
GLYMA13G26550 Glycine max GLYMA13G26550 N 0.000
GLYMA15G37451 Glycine max GLYMA15G37451 N 0.000
POPTR_0001s06580 Populus trichocarpa POPTR_0001s06580 N 0.000
POPTR_0003s19470 Populus trichocarpa POPTR_0003s19470 N 0.000
PRUPE_ppa007968mg Prunus persica PRUPE_ppa007968mg N 0.000
LjSGA_030847.2 Lotus japonicus LjSGA_030847.2 N 0.000