CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SAKL0E10714g
(
Lachancea kluyveri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SAKL0E10714g
T146634_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AZF1
M00039_2.00
Saccharomyces cerevisiae
YNNHNNNNNN
NNNNNNDNNR
PBM
Badis et al.(2008)
AZF1_2102
0.772
0.793
AZF1
M07469_2.00
Saccharomyces cerevisiae
NTTCTTTTN
NAAAAGAAN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0277.1
0.772
0.793
AZF1
M08542_2.00
Saccharomyces cerevisiae
BTTCTTTTB
VAAAAGAAV
Misc
DeBoer et al.(2011)
YOR113W_499
0.772
0.793
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SAKL0E10714g
C2H2 ZF
540
562
HECPYCHKCFTQSTHLEVHVRSH
SAKL0E10714g
C2H2 ZF
568
590
FQCEYCGKRFTQGGNLRTHTRLH
SAKL0E10714g
C2H2 ZF
596
618
YSCEKCGKRFSRKGNLAAHMLTH
SAKL0E10714g
C2H2 ZF
624
649
YHCKLDGCSKSFTQLGNLKAHQNRFH
Links
Other
C2H2 ZF
family TFs
Other
Lachancea kluyveri
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy