SAKL0H24816g (Lachancea kluyveri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SAKL0H24816g T146650_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
COM2
M00024_2.00
Saccharomyces cerevisiae
VCCCCTDT

AHAGGGGB
PBM
Badis et al.(2008)
YER130C_2103
0.798 0.870
COM2
M01530_2.00
Saccharomyces cerevisiae
YYYYKNWHN

NDWNMRRRR
PBM
Zhu et al.(2009)
Yer130c
0.798 0.870
COM2
M07454_2.00
Saccharomyces cerevisiae
NCCCCTWTH

DAWAGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0423.1
0.798 0.870
COM2
M08521_2.00
Saccharomyces cerevisiae
NCCCCTWTH

DAWAGGGGN
Misc
DeBoer et al.(2011)
YER130C_534
0.798 0.870
KLLA0_C17072g
M01038_2.00
Kluyveromyces lactis
CYCCTDDNN

NNHHAGGRG
PBM
Siggers et al.(2014)
KLL0C17072gKlac
0.790 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0H24816g C2H2 ZF 354 377
SAKL0H24816g C2H2 ZF 383 405

Links

Other C2H2 ZF family TFs
Other Lachancea kluyveri TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
6354_YER130C Saccharomyces mikatae 6354_YER130C I 0.798
6484_YER130C Saccharomyces paradoxus 6484_YER130C I 0.798
6723_YER130C Saccharomyces bayanus 6723_YER130C I 0.798
AACERI_AaceriACL057W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACL057W I 0.816
AGOS_ACL057W Ashbya gossypii AGOS_ACL057W I 0.816
CAGL0K02145g Candida glabrata CAGL0K02145g I 0.798
Ecym_8403 Eremothecium cymbalariae Ecym_8403 I 0.822
KAFR_0B02160 Kazachstania africana KAFR_0B02160 I 0.768
KLLA0_C17072g Kluyveromyces lactis KLLA0_C17072g D 0.790
KLTH0E06688g Lachancea thermotolerans KLTH0E06688g I 0.769
KLTH0E06688g Kluyveromyces thermotolerans KLTH0E06688g I 0.769
KNAG_0D02120 Kazachstania naganishii KNAG_0D02120 I 0.767
KNAG_0G01280 Kazachstania naganishii KNAG_0G01280 I 0.801
Kpol_1031p42 Vanderwaltozyma polyspora Kpol_1031p42 I 0.768
Kwal_17241 Kluyveromyces waltii Kwal_17241 I 0.769
LALA0_S01e12970g Lachancea lanzarotensis LALA0_S01e12970g I 0.798
NDAI_0B01930 Naumovozyma dairenensis NDAI_0B01930 I 0.772
PGUG_03478 Meyerozyma guilliermondii PGUG_03478 N 0.758
PGUG_03478 Candida guilliermondii PGUG_03478 N 0.758
SU7_0930 Saccharomyces arboricola SU7_0930 I 0.798
TDEL_0B04670 Torulaspora delbrueckii TDEL_0B04670 I 0.798
TPHA_0D01050 Tetrapisispora phaffii TPHA_0D01050 I 0.767
COM2 Saccharomyces cerevisiae YER130C D 0.798
ZBAI_08232 Zygosaccharomyces bailii ZBAI_08232 I 0.805
ZYRO0G19140g Zygosaccharomyces rouxii ZYRO0G19140g I 0.816