XP_002492475.1 (Pichia pastoris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XP_002492475.1 T146747_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YGR067C
M00029_2.00 		Saccharomyces cerevisiae
HVCCCCNC
GNGGGGBD		 PBM
Badis et al.(2008)
YGR067C_2151 		0.777 0.826
YGR067C
M01534_2.00 		Saccharomyces cerevisiae
NCCCCDCNNN
NNNGHGGGGN		 PBM
Zhu et al.(2009)
Ygr067c 		0.777 0.826
YGR067C
M07459_2.00 		Saccharomyces cerevisiae
NCCCCDCNNNNNNN
NNNNNNNGHGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0425.1 		0.777 0.826
YGR067C
M08528_2.00 		Saccharomyces cerevisiae
NCCCCDCNNNNNNN
NNNNNNNGHGGGGN		 Misc
DeBoer et al.(2011)
YGR067C_548 		0.777 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002492475.1 C2H2 ZF 7 29
XP_002492475.1 C2H2 ZF 35 58

Links

Other C2H2 ZF family TFs
Other Pichia pastoris TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAS_chr3_0259 Komagataella pastoris PAS_chr3_0259 I 0.827
KUCA_T00003077001 Kuraishia capsulata KUCA_T00003077001 I 0.790
HPODL_04127 Ogataea parapolymorpha HPODL_04127 I 0.786
SAKL0H04070g Lachancea kluyveri SAKL0H04070g I 0.777
AGOS_AFR580C Ashbya gossypii AGOS_AFR580C I 0.777
YGR067C Saccharomyces cerevisiae YGR067C D 0.777
AACERI_AaceriAFR580C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR580C I 0.777
8169_YGR067C Saccharomyces paradoxus 8169_YGR067C I 0.777
Ecym_2760 Eremothecium cymbalariae Ecym_2760 I 0.771
TDEL_0E01590 Torulaspora delbrueckii TDEL_0E01590 I 0.771
KLLA0_B07909g Kluyveromyces lactis KLLA0_B07909g I 0.771
8484_Multiple Saccharomyces mikatae 8484_Multiple I 0.771
Kpol_472p10 Vanderwaltozyma polyspora Kpol_472p10 I 0.770
BN7_2468 Wickerhamomyces ciferrii BN7_2468 I 0.770
CORT_0F03430 Candida orthopsilosis CORT_0F03430 I 0.766
SPAPADRAFT_52462 Spathaspora passalidarum SPAPADRAFT_52462 I 0.765
KNAG_0D04190 Kazachstania naganishii KNAG_0D04190 I 0.755