CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002493573.1
(
Pichia pastoris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002493573.1
T146754_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SFP1
M01536_2.00
Saccharomyces cerevisiae
WTTTTTTY
RAAAAAAW
PBM
Zhu et al.(2009)
Sfp1
0.827
0.978
SFP1
M08536_2.00
Saccharomyces cerevisiae
NNNNDRAAAAWTTTTYYNBDN
NHVNRRAAAAWTTTTYHNNNN
Misc
DeBoer et al.(2011)
YLR403W_797
0.827
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002493573.1
C2H2 ZF
287
312
FKCPVVGCDKTYKNQNGLKYHRLHGH
XP_002493573.1
C2H2 ZF
348
372
YRCEVCGKRYKNLNGLKYHRGHSTH
Links
Other
C2H2 ZF
family TFs
Other
Pichia pastoris
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy