CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002493922.1
(
Pichia pastoris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002493922.1
T146758_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ADR1
M00021_2.00
Saccharomyces cerevisiae
NACCCCRCHN
NDGYGGGGTN
PBM
Badis et al.(2008)
ADR1_4492
0.766
0.783
ADR1
M07451_2.00
Saccharomyces cerevisiae
NCCCCRM
KYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0268.1
0.766
0.783
ADR1
M08517_2.00
Saccharomyces cerevisiae
NCCCCRM
KYGGGGN
Misc
DeBoer et al.(2011)
YDR216W_576
0.766
0.783
ADR1
M10388_2.00
Saccharomyces cerevisiae
MCYCCD
HGGRGK
Transfac
Matys et al.(2006)
F$ADR1_01
0.766
0.783
ADR1
M10389_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ADR1_Q6
0.766
0.783
rst2
M01186_2.00
Schizosaccharomyces pombe
NNCCCCDCNN
NNGHGGGGNN
PBM
Lambert et al.(2019)
pTH11144
0.757
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002493922.1
C2H2 ZF
40
62
FVCQTCTRAFARQEHLKRHERSH
XP_002493922.1
C2H2 ZF
68
91
FSCGICSRKFSRRDLLLRHAQKLH
Links
Other
C2H2 ZF
family TFs
Other
Pichia pastoris
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy