XP_002493922.1 (Pichia pastoris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XP_002493922.1 T146758_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ADR1
M00021_2.00
Saccharomyces cerevisiae
NACCCCRCHN

NDGYGGGGTN
PBM
Badis et al.(2008)
ADR1_4492
0.766 0.783
ADR1
M07451_2.00
Saccharomyces cerevisiae
NCCCCRM

KYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0268.1
0.766 0.783
ADR1
M08517_2.00
Saccharomyces cerevisiae
NCCCCRM

KYGGGGN
Misc
DeBoer et al.(2011)
YDR216W_576
0.766 0.783
ADR1
M10388_2.00
Saccharomyces cerevisiae
MCYCCD

HGGRGK
Transfac
Matys et al.(2006)
F$ADR1_01
0.766 0.783
ADR1
M10389_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ADR1_Q6
0.766 0.783
rst2
M01186_2.00
Schizosaccharomyces pombe
NNCCCCDCNN

NNGHGGGGNN
PBM
Lambert et al.(2019)
pTH11144
0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002493922.1 C2H2 ZF 40 62
XP_002493922.1 C2H2 ZF 68 91

Links

Other C2H2 ZF family TFs
Other Pichia pastoris TFs

Invalid Input OrderBy

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action